RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 GTF2H4Q92759 462 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 NABP1Q96AH0 204 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-203ENST00000409225 MCHR1Q99705 422 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 MRPL13Q9BYD1 178 aaKnown RBP13.93□□□□□ -0.18
CHMP3-203ENST00000409225 WNT5BQ9H1J7 359 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 POFUT1Q9H488 388 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 ELOVL3Q9HB03 270 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 SLCO1B3Q9NPD5 702 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF229Q9UJW7 825 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 UGT2A1Q9Y4X1 527 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 KIR2DS1A0A191URI9 304 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 A0A1W2PRG6 482 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 PRORSD1PA6NEY8 169 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
CHMP3-203ENST00000409225 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 M0R3H8 397 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 CHP2O43745 196 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 F13BP05160 661 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 ACADSP16219 412 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 AQP1P29972 269 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 MMP16P51512 607 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 POLR2JP52435 117 aaKnown RBP13.92□□□□□ -0.18
CHMP3-203ENST00000409225 PROK1P58294 105 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 SLC27A4Q6P1M0 643 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF613Q6PF04 617 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 TTC33Q6PID6 262 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-203ENST00000409225 SLC2A7Q6PXP3 512 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 C10orf111Q8N326 155 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 ASB10Q8WXI3 467 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 NSMAFQ92636 917 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 PLEKHA8Q96JA3 519 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 FAM71F1Q96KD3 344 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-203ENST00000409225 C4orf45Q96LM5 186 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 OR2V2Q96R30 315 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 OR2H1Q9GZK4 316 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 TMEM165Q9HC07 324 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 ZIM2Q9NZV7 527 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 MIOXQ9UGB7 285 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 IL19Q9UHD0 177 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
CHMP3-203ENST00000409225 IGKV1D-43A0A0B4J1Z2 117 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 SURF4O15260 269 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ASAH2BP0C7U1 165 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 GSTM3P21266 225 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 FMODQ06828 376 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 C2orf68Q2NKX9 166 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 RUNDC3AQ59EK9 446 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 TTMPQ5BVD1 217 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ARMC8Q8IUR7 673 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ALDH16A1Q8IZ83 802 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 FITM2Q8N6M3 262 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 GOLGA6L1Q8N7Z2 621 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF420Q8TAQ5 688 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-203ENST00000409225 SSMEM1Q8WWF3 244 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 NEIL1Q96FI4 390 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF607Q96SK3 696 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 SEPHS2Q99611 448 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ROPN1BQ9BZX4 212 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-203ENST00000409225 ROPN1Q9HAT0 212 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-203ENST00000409225 MAN2C1Q9NTJ4 1040 aa13.91□□□□□ -0.18
CHMP3-203ENST00000409225 H0YL77 283 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 GPR137BO60478 399 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 ICMTO60725 284 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 FMO6PO60774 539 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 CYB5R3P00387 301 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-203ENST00000409225 THY1P04216 161 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 KITP10721 976 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 HOXB9P17482 250 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-203ENST00000409225 CPT2P23786 658 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF133P52736 654 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-203ENST00000409225 UGT2B15P54855 530 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
CHMP3-203ENST00000409225 BPIFB3P59826 476 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 RPL15P61313 204 aaKnown RBP13.9□□□□□ -0.18
CHMP3-203ENST00000409225 RPL18Q07020 188 aaKnown RBP13.9□□□□□ -0.18
CHMP3-203ENST00000409225 BST1Q10588 318 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 SCARB2Q14108 478 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 SMYD1Q8NB12 490 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 OR8B3Q8NGG8 313 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 DYRK2Q92630 601 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 OR8B2Q96RD0 313 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 TMEM246Q9BRR3 403 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 PCGF1Q9BSM1 259 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 GCM1Q9NP62 436 aa13.9□□□□□ -0.18
CHMP3-203ENST00000409225 TRPC5OSA6NMA1 111 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 CENPBD1B2RD01 187 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 HDAC3O15379 428 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 SERPINB7O75635 380 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 LYPD3O95274 346 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 ABHD16AO95870 558 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 CSF1P09603 554 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 LAP3P28838 519 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 PITPNBP48739 271 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 CD47Q08722 323 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 NPTX1Q15818 432 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 ARL9Q6T311 187 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms