RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 WDYHV1Q96HA8 205 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 CDADC1Q9BWV3 514 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ACOXLQ9NUZ1 547 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ASF1BQ9NVP2 202 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 SPRR3Q9UBC9 169 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 FOXD3Q9UJU5 478 aaPredicted RBP18.59■□□□□ 0.57
TPM1-208ENST00000404484 TENM4Q6N022 2769 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 AQP7O14520 342 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 FGF9P31371 208 aaPredicted RBP18.59■□□□□ 0.57
TPM1-208ENST00000404484 SERPINB10P48595 397 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 SELENOPP49908 381 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ZNF84P51523 738 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ROM1Q03395 351 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 EIF2B1Q14232 305 aaKnown RBP18.59■□□□□ 0.57
TPM1-208ENST00000404484 CDK5R1Q15078 307 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 KCNMB1Q16558 191 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 DGUOKQ16854 277 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 RPUSD3Q6P087 351 aaKnown RBP18.59■□□□□ 0.57
TPM1-208ENST00000404484 LRFN4Q6PJG9 635 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ARL9Q6T311 187 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 MS4A15Q8N5U1 240 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ABHD3Q8WU67 409 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 TMEM203Q969S6 136 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 SMIM19Q96E16 107 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 OR8B4Q96RC9 309 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 TMED9Q9BVK6 235 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ULBP2Q9BZM5 246 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 KCNN2Q9H2S1 579 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 CXorf56Q9H5V9 222 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 SEC61A2Q9H9S3 476 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 SIAEQ9HAT2 523 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 PARPBPQ9NWS1 579 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 MRM2Q9UI43 246 aaKnown RBP18.59■□□□□ 0.57
TPM1-208ENST00000404484 ST6GALNAC2Q9UJ37 374 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 CAMK2AQ9UQM7 478 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 ZNF175Q9Y473 711 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 E9PI62 339 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 GPRIN2O60269 458 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 MPZL1O95297 269 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 OR8G3PP0DMU2 310 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 FCGR2AP12318 317 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 MEP1BQ16820 701 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 ZNF679Q8IYX0 411 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 GPR137CQ8N3F9 429 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 OR52N5Q8NH56 324 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 DYNC2LI1Q8TCX1 351 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 TM9SF2Q99805 663 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 ABHD6Q9BV23 337 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 MROQ9BYG7 248 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 ZNF407Q9C0G0 2248 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 POLR1DQ9Y2S0 133 aa18.58■□□□□ 0.56
TPM1-208ENST00000404484 SIRT4Q9Y6E7 314 aaPredicted RBP18.58■□□□□ 0.56
TPM1-208ENST00000404484 OR6C65A6NJZ3 312 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 ZNF724A8MTY0 619 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 DHHO43323 396 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 RGS9O75916 674 aaPredicted RBP18.57■□□□□ 0.56
TPM1-208ENST00000404484 ABHD16AO95870 558 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 SERPINA3P01011 423 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 EDNRAP25101 427 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 RPS27P42677 84 aaKnown RBP18.57■□□□□ 0.56
TPM1-208ENST00000404484 RIPPLY2Q5TAB7 128 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 LIPNQ5VXI9 398 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 ZNF544Q6NX49 715 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 FOXL2NBQ6ZUU3 175 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 KRT77Q7Z794 578 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 MCEMP1Q8IX19 187 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 SARAFQ96BY9 339 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 KCTD7Q96MP8 289 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 PRDM14Q9GZV8 571 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 GP6Q9HCN6 339 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 TXNL4BQ9NX01 149 aaKnown RBP18.57■□□□□ 0.56
TPM1-208ENST00000404484 NOSIPQ9Y314 301 aaKnown RBP18.57■□□□□ 0.56
TPM1-208ENST00000404484 DNAJC13O75165 2243 aa18.57■□□□□ 0.56
TPM1-208ENST00000404484 FLNCQ14315 2725 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 TRBV2A0A0J9YWF9 115 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 PRR32B1ATL7 298 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 MAGEB4O15481 346 aaPredicted RBP18.56■□□□□ 0.56
TPM1-208ENST00000404484 ZNF254O75437 659 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 CRYABP02511 175 aaKnown RBP18.56■□□□□ 0.56
TPM1-208ENST00000404484 GDI2P50395 445 aaKnown RBP18.56■□□□□ 0.56
TPM1-208ENST00000404484 LSM6P62312 80 aaKnown RBP18.56■□□□□ 0.56
TPM1-208ENST00000404484 SLC3A1Q07837 685 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 DEGS2Q6QHC5 323 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 FNDC9Q8TBE3 224 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 RPS4Y2Q8TD47 263 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 BCO1Q9HAY6 547 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 POLE4Q9NR33 117 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 PLSCR2Q9NRY7 297 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 CCDC59Q9P031 241 aaKnown RBP18.56■□□□□ 0.56
TPM1-208ENST00000404484 CYB5R1Q9UHQ9 305 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 GRIP1Q9Y3R0 1128 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 UGT2A1Q9Y4X1 527 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 ESPL1Q14674 2120 aa18.56■□□□□ 0.56
TPM1-208ENST00000404484 UBR5O95071 2799 aaPredicted RBP18.56■□□□□ 0.56
TPM1-208ENST00000404484 PSMD9O00233 223 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 PSKH1P11801 424 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 RIDAP52758 137 aaKnown RBP18.55■□□□□ 0.56
TPM1-208ENST00000404484 FABP5Q01469 135 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 RPTNQ6XPR3 784 aa18.55■□□□□ 0.56
TPM1-208ENST00000404484 SIAH3Q8IW03 269 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms