RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SEC61A2Q9H9S3 476 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 BOKQ9UMX3 212 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 GTF2A1LQ9UNN4 478 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 EIF1AYO14602 144 aaKnown RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF254O75437 659 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 QDPRP09417 244 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 AGFG1P52594 562 aaKnown RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 RAC3P60763 192 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 IL18Q14116 193 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 POU4F3Q15319 338 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 OR1C1Q15619 314 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 GGNQ86UU5 652 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 OR2M7Q8NG81 312 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 TRMT10AQ8TBZ6 339 aaKnown RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 GPR148Q8TDV2 347 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 HTRA1Q92743 480 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF385AQ96PM9 386 aaKnown RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 GFI1Q99684 422 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 FAM173AQ9BQD7 235 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 HES7Q9BYE0 225 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 CYB5R1Q9UHQ9 305 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 FBXL3Q9UKT7 428 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 TBC1D24Q9ULP9 559 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF292O60281 2723 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 RIF1Q5UIP0 2472 aaKnown RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 FUOMA2VDF0 154 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 ANKRD61A6NGH8 418 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 NPIPA2E9PIF3 369 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 NPIPA3F8WFD2 350 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 GPR171O14626 319 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 TLX3O43711 291 aaPredicted RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 CDAP32320 146 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 STARP49675 285 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 LRRC28Q86X40 367 aaPredicted RBP17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 OR2B2Q9GZK3 357 aa17.64■□□□□ 0.41
PDLIM5-205ENST00000380180 DMXL1Q9Y485 3027 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 A0A0B4J203 849 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 PDCD5O14737 125 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 SRSF10O75494 262 aaKnown RBP17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 SLC34A2O95436 690 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 PTTG1O95997 202 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 EIF4EP06730 217 aaKnown RBP17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 CSF3P09919 207 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 CARD18P57730 90 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 STAC2Q6ZMT1 411 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 CATSPERDQ86XM0 798 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 UBQLNLQ8IYU4 475 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF433Q8N7K0 673 aaPredicted RBP17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 IL17RDQ8NFM7 739 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 OR9K2Q8NGE7 335 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 TMEM106AQ96A25 262 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 CYSLTR2Q9NS75 346 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 CENPMQ9NSP4 180 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 EXTL2Q9UBQ6 330 aa17.63■□□□□ 0.41
PDLIM5-205ENST00000380180 A0A1W2PQ09 198 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 SNRPBP14678 240 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 PTBP1P26599 531 aaKnown RBP eCLIP17.62■□□□□ 0.419e-7■■■■■ 28.1
PDLIM5-205ENST00000380180 SUCLG1P53597 346 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 CDC20Q12834 499 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 DEGS2Q6QHC5 323 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 ESPNLQ6ZVH7 1005 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 SULF2Q8IWU5 870 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 OR5H6Q8NGV6 325 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 RNF133Q8WVZ7 376 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 TCF7L1Q9HCS4 588 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 EMC7Q9NPA0 242 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 ASCL3Q9NQ33 180 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 GLTPQ9NZD2 209 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 ABRACLQ9P1F3 81 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 EMC9Q9Y3B6 208 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 DNAJC13O75165 2243 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 TRBV5-7A0A0A0MS05 114 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 SMAD9O15198 467 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 DNPH1O43598 174 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 RAF1P04049 648 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 SPNP16150 400 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 NPR2P20594 1047 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 RFC3P40938 356 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 NBL1P41271 181 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 EIF1AXP47813 144 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 BCAP31P51572 246 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 GFRA1P56159 465 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 C11orf91Q3C1V1 193 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF544Q6NX49 715 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 GDPD3Q7L5L3 318 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 GALNT16Q8N428 558 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 OR2M2Q96R28 347 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 C1orf198Q9H425 327 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 BRD7Q9NPI1 651 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 R4GMQ9 66 aa17.62■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF407Q9C0G0 2248 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 H2BFMP0C1H6 154 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 SCN1BQ07699 218 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 ZIC4Q8N9L1 334 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 SLAMF6Q96DU3 332 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 SLITRK2Q9H156 845 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 LHFPL6Q9Y693 200 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 V9GY05 133 aa17.61■□□□□ 0.41
PDLIM5-205ENST00000380180 A6NL46 340 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms