RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZNF208O43345 1280 aa14.88□□□□□ -0.03
TRIM39-201ENST00000376656 DOK2O60496 412 aa14.88□□□□□ -0.03
TRIM39-201ENST00000376656 CD79AP11912 226 aa14.88□□□□□ -0.03
TRIM39-201ENST00000376656 APEHP13798 732 aaKnown RBP14.88□□□□□ -0.03
TRIM39-201ENST00000376656 CXADRP78310 365 aa14.88□□□□□ -0.03
TRIM39-201ENST00000376656 FAM78AQ5JUQ0 283 aa14.88□□□□□ -0.03
TRIM39-201ENST00000376656 PAPD4Q6PIY7 484 aaKnown RBP14.88□□□□□ -0.03
TRIM39-201ENST00000376656 CDH23Q9H251 3354 aa14.88□□□□□ -0.03
TRIM39-201ENST00000376656 HLA-GP17693 338 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 CCR4P51679 360 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 PDZK1IP1Q13113 114 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 TOMM20Q15388 145 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 AVPI1Q5T686 147 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 EEF1A1P5Q5VTE0 462 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 OR51A2Q8NGJ7 313 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 OTOSQ8NHW6 89 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 TMED6Q8WW62 240 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 ZNF524Q96C55 264 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 CMKLR1Q99788 373 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 SEMA6CQ9H3T2 930 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 PTPRSQ13332 1948 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 DCDC2BA2VCK2 349 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 TGFBR3LH3BV60 316 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 EIF3GO75821 320 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM39-201ENST00000376656 SNAPINO95295 136 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 RPS21P63220 83 aaKnown RBP14.87□□□□□ -0.03
TRIM39-201ENST00000376656 IL13RA1P78552 427 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 EGR4Q05215 589 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 PAQR4Q8N4S7 273 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-201ENST00000376656 DMBX1Q8NFW5 382 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 OR14C36Q8NHC7 312 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 MITD1Q8WV92 249 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 OR1E3Q8WZA6 343 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 DHDHQ9UQ10 334 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 TMEM14AQ9Y6G1 99 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 A0A0B4J2A0 478 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 TXNDC12O95881 172 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 ASAH2BP0C7U1 165 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 MFGE8Q08431 387 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-201ENST00000376656 SLC17A1Q14916 467 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 CDNFQ49AH0 187 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 SLC22A6Q4U2R8 563 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 ATG4DQ86TL0 474 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-201ENST00000376656 ZNF584Q8IVC4 421 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 FOXRED1Q96CU9 486 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-201ENST00000376656 OR8B4Q96RC9 309 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 SLC22A11Q9NSA0 550 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 TMEM100Q9NV29 134 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 GDE1Q9NZC3 331 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 SHPKQ9UHJ6 478 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 FAM96BQ9Y3D0 163 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 CSAG2Q9Y5P2 127 aa14.87□□□□□ -0.03
TRIM39-201ENST00000376656 HCRTR1O43613 425 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 RENP00797 406 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 VAMP1P23763 118 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ADAM8P78325 824 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 PDGFRLQ15198 375 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 SWI5Q1ZZU3 235 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ALG11Q2TAA5 492 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 BCORP1Q8N888 145 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ACBD4Q8NC06 268 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ADAD2Q8NCV1 583 aaKnown RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 STOML3Q8TAV4 291 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 NKD1Q969G9 470 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 KTI12Q96EK9 354 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CPNE2Q96FN4 548 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CRB3Q9BUF7 120 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 SLCO5A1Q9H2Y9 848 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 Q9N2J8 555 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 UNC80Q8N2C7 3258 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 POM121BA6NF01 834 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 F8VVB4 439 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 F8VWA3 439 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 IL2RAP01589 272 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 HLA-DQA2P01906 255 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CTSBP07858 339 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ACAA1P09110 424 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CT45A8P0DMV1 189 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CT45A9P0DMV2 189 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 TPT1P13693 172 aaKnown RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CENPAP49450 140 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 DEFB115Q30KQ5 88 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CT45A2Q5DJT8 189 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 NKAPLQ5M9Q1 402 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 OR52W1Q6IF63 320 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 TMEM184AQ6ZMB5 413 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 TMPPEQ6ZT21 453 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 GVQW1Q8N7I0 195 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 OR4K17Q8NGC6 315 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ELP5Q8TE02 316 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ASB5Q8WWX0 329 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 DCUN1D4Q92564 292 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 PHB2Q99623 299 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 KLHDC3Q9BQ90 382 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 UQCC1Q9NVA1 299 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 C13orf42A0A1B0GVH6 325 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 WIPF3A6NGB9 483 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 LINC00587B1AMM8 73 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 ACTR1BP42025 376 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 PPICP45877 212 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms