RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ELAVL3Q14576 367 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PSAPL1Q6NUJ1 521 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF384Q8TF68 577 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 NKX3-1Q99801 234 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PTDSS2Q9BVG9 487 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RBCK1Q9BYM8 510 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CPSF4LA6NMK7 179 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CSTBP04080 98 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CRHP06850 196 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 C1QTNF9P0C862 333 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TMIGD3P0DMS9 266 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 HTR5AP47898 357 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ULBP3Q9BZM4 244 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 EIF5A2Q9GZV4 153 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 METTL17Q9H7H0 456 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ADH7P40394 386 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CDKN2AP42771 156 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DHRS7BQ6IAN0 325 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DOK3Q7L591 496 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CA13Q8N1Q1 262 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR6J1Q8NGC5 347 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DZANK1Q9NVP4 752 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 HIST1H1DP16402 221 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 STARD6P59095 220 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ADIGQ0VDE8 80 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SELENBP1Q13228 472 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 S100A7L2Q5SY68 101 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ADAD2Q8NCV1 583 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SPACA7Q96KW9 195 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SGIP1Q9BQI5 828 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 M0R1X1 148 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PLPP2O43688 288 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GPR12P47775 334 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SPTSSAQ969W0 71 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 NPY6RQ99463 290 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TAF9BQ9HBM6 251 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OPN4Q9UHM6 478 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SLC22A13Q9Y226 551 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 MYH13Q9UKX3 1938 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 MLF1P58340 268 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SIX1Q15475 284 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF695Q8IW36 515 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DNASE1L2Q92874 299 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR10A5Q9H207 317 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR10A2Q9H208 303 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GJD2Q9UKL4 321 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DCTN6O00399 190 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ADAMTS4O75173 837 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PPBPP02775 128 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FGF2P09038 288 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 AMY2BP19961 511 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FASLGP48023 281 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GATMP50440 423 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PLPPR5Q32ZL2 321 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ATOH7Q8N100 152 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GPER1Q99527 375 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TTTY10Q9BZA0 68 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 MTFP1Q9UDX5 166 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 VSIG4Q9Y279 399 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TP53TG5Q9Y2B4 290 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RREB1Q92766 1687 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 GLIS1Q8NBF1 620 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 KREMEN2Q8NCW0 462 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MUS81Q96NY9 551 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MMP28Q9H239 520 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 GLSO94925 669 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CA3P07451 260 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 INHBBP09529 407 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 UBE2NP61088 152 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 FZD2Q14332 565 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 RAET1GQ6H3X3 334 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 UEVLDQ8IX04 471 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 C20orf196Q8IYI0 205 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 NIPSNAP1Q9BPW8 284 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 PRSS16Q9NQE7 514 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 RRP8O43159 456 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MAP2K5Q13163 448 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 IAH1Q2TAA2 248 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CLEC2AQ6UVW9 174 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ST8SIA1Q92185 356 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 DDX31Q9H8H2 851 aaKnown RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CGGBP1Q9UFW8 167 aaPredicted RBP3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CENPVL1A0A0U1RR11 272 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ARPC5O15511 151 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CD8AP01732 235 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ALDOBP05062 364 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 OR5G3P0C626 314 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 DPTQ07507 201 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TM4SF20Q53R12 229 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 SFRP5Q5T4F7 317 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 LMF1Q96S06 567 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 CDRT15L2A8MXV6 281 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 TNFSF9P41273 254 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 MS4A2Q01362 244 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 DHRS2Q13268 280 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 IL20RBQ6UXL0 311 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 ABHD15Q6UXT9 468 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 NANOGP1Q8N7R0 232 aa3.44□□□□□ -1.86
SYNE1-207ENST00000367255 IGKV6-21A0A0C4DH24 114 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms