RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FBXO16Q8IX29 292 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ABHD12Q8N2K0 398 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SVOPLQ8N434 492 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CEP112Q8N8E3 955 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 C4orf32Q8N8J7 132 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR5T3Q8NGG3 340 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR5AR1Q8NGP9 310 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR2G2Q8NGZ5 317 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ARPC1AQ92747 370 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ISOC2Q96AB3 205 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ITCHQ96J02 903 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 POM121L2Q96KW2 1035 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 C9orf85Q96MD7 179 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 PLEKHF1Q96S99 279 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ECSITQ9BQ95 431 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 PELOQ9BRX2 385 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CHCHD5Q9BSY4 110 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RAB34Q9BZG1 259 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ACTR3CQ9C0K3 210 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 KCNJ16Q9NPI9 418 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CTSZQ9UBR2 303 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CLN8Q9UBY8 286 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 KIF25Q9UIL4 384 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ATP6V1DQ9Y5K8 247 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 PCNX1Q96RV3 2341 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZZEF1O43149 2961 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 KCNE1BA0A087WTH5 132 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1W2PQ72 361 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ERVV-1B6SEH8 477 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 LOC110117498-PIK3R3F6TDL0 507 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 GABRPO00591 440 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SLC17A2O00624 439 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 POLR3GO15318 223 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 EIF3GO75821 320 aaKnown RBP eCLIP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CCL2P13500 99 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 IGLL1P15814 213 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 EIF2S2P20042 333 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 PRDX3P30048 256 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OTX1P32242 354 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 NPBWR2P48146 333 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RIDAP52758 137 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RAB10P61026 200 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 UBE2KP61086 200 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 PAFAH1B2P68402 229 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 IRX1P78414 480 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RAD51Q06609 339 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF726P1Q15940 193 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 QRICH1Q2TAL8 776 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 EIPR1Q53HC9 387 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 GCNT7Q6ZNI0 430 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CATSPER3Q86XQ3 398 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF677Q86XU0 584 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CD302Q8IX05 232 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 Q8N9P0 234 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR8K3Q8NH51 312 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SMARCD2Q92925 531 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 C19orf60Q96EN9 201 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 UTP23Q9BRU9 249 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 FAM107BQ9H098 131 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 UBE2ZQ9H832 354 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 DYRK4Q9NR20 520 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 TREM2Q9NZC2 230 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CLEC2DQ9UHP7 191 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 COPS3Q9UNS2 423 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 C1orf167Q5SNV9 1468 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ERICH3Q5RHP9 1530 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 TCF20Q9UGU0 1960 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 KIF1BO60333 1816 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MEGF8Q7Z7M0 2845 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CELSR1Q9NYQ6 3014 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GLYATL1P3A0A0U1RQE8 302 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SMIM28A0A1B0GU29 152 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 H7C1H1 209 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 K7ERQ8 282 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 M0R3G1 203 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 B4GALT5O43286 388 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SNAI2O43623 268 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 DPM1O60762 260 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PTTG1O95997 202 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TCP1P17987 556 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IFNA8P32881 189 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 HCAR3P49019 387 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF763Q0D2J5 394 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 FCHO2Q0JRZ9 810 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC173Q0VFZ6 552 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 KRT71Q3SY84 523 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MEDAGQ5VYS4 303 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF497Q6ZNH5 498 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC74BQ6ZQY2 392 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 NCCRP1Q6ZVX7 275 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF571Q7Z3V5 609 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SPATA24Q86W54 205 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 HIPK1Q86Z02 1210 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TRIML2Q8N7C3 387 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF557Q8N988 423 aaPredicted RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CYB561A3Q8NBI2 242 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 OR4C5Q8NGB2 326 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 FAM76AQ8TAV0 307 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC58Q96CX6 371 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PAGE5Q96GU1 130 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms