RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CDC20BQ86Y33 519 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 EMC7Q9NPA0 242 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 MKRN2OSH3BPM6 223 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 IRS1P35568 1242 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 RETREG3Q86VR2 466 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 OR1M1Q8NGA1 313 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 OR51F2Q8NH61 342 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 C1QTNF3Q9BXJ4 246 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 TAS2R5Q9NYW4 299 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 FAM96BQ9Y3D0 163 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 STMND1H3BQB6 276 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 CALCBP10092 127 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 LILRA3Q8N6C8 439 aaPredicted RBP21.13■□□□□ 0.97
NPAS3-201ENST00000346562 MYH11P35749 1972 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 XRCC2O43543 280 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 ADIRFQ15847 76 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 ZNF628Q5EBL2 1059 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 SOHLH1Q5JUK2 328 aa21.13■□□□□ 0.97
NPAS3-201ENST00000346562 ACKR3P25106 362 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 ZNF573Q86YE8 665 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 BAHD1Q8TBE0 780 aaPredicted RBP21.12■□□□□ 0.97
NPAS3-201ENST00000346562 SLAMF6Q96DU3 332 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 Q96M85 177 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 TRGV8A0A0C4DH27 118 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 SH2D7A6NKC9 451 aaPredicted RBP21.12■□□□□ 0.97
NPAS3-201ENST00000346562 FBXO4Q9UKT5 387 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 TEX51A0A1B0GUA7 166 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 GLULP15104 373 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 POU3F3P20264 500 aaPredicted RBP21.12■□□□□ 0.97
NPAS3-201ENST00000346562 HTR4Q13639 388 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 TMEM200AQ86VY9 491 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 ADGRF3Q8IZF5 1079 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 PXT1Q8NFP0 134 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 WFDC5Q8TCV5 224 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 UFSP2Q9NUQ7 469 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 TAS2R4Q9NYW5 299 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 NTNG1Q9Y2I2 539 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 TRMT12Q53H54 448 aaKnown RBP21.12■□□□□ 0.97
NPAS3-201ENST00000346562 LYSMD1Q96S90 227 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 MYH6P13533 1939 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 H0Y8G0 127 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 M0QZ24 198 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 YIF1AO95070 293 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 SEH1LQ96EE3 360 aa21.12■□□□□ 0.97
NPAS3-201ENST00000346562 MKRN2Q9H000 416 aaKnown RBP21.12■□□□□ 0.97
NPAS3-201ENST00000346562 ADGRG3Q86Y34 549 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 OR51H1Q8NH63 302 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 ST8SIA1Q92185 356 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 CGGBP1Q9UFW8 167 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-201ENST00000346562 LOC107986453A0A1B0GWG9 222 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 C5orf49A4QMS7 147 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 SIRPB1O00241 398 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 TMEM240Q5SV17 173 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 JAM3Q9BX67 310 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 RGPD8O14715 1765 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-201ENST00000346562 K7ESM1 405 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 ANKRD33Q7Z3H0 272 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 PTRH1Q86Y79 214 aaKnown RBP21.11■□□□□ 0.97
NPAS3-201ENST00000346562 KMT5CQ86Y97 462 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 OPALINQ96PE5 141 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 B3GALT5Q9Y2C3 310 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 LGI1O95970 557 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 GUSBP08236 651 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 PTBP1P26599 531 aaKnown RBP eCLIP21.11■□□□□ 0.97
NPAS3-201ENST00000346562 NDUFA6P56556 154 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 FAPQ12884 760 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 HSD17B11Q8NBQ5 300 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 YIPF5Q969M3 257 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 NDFIP1Q9BT67 221 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 BANF2Q9H503 90 aa21.11■□□□□ 0.97
NPAS3-201ENST00000346562 LGALS8O00214 317 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 CASP3P42574 277 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 NLRC3Q7RTR2 1065 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 ZNF321PQ8N8H1 164 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 OR51E1Q8TCB6 317 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 S1PR3Q99500 378 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 CTRB1P17538 263 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 M6PRP20645 277 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 CAPZBP47756 277 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 TAS2R45P59539 299 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 ZNF85Q03923 595 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 CTRB2Q6GPI1 263 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 NRARPQ7Z6K4 114 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 TMEM104Q8NE00 496 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 LFNGQ8NES3 379 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 NUPL2O15504 423 aaKnown RBP21.1■□□□□ 0.97
NPAS3-201ENST00000346562 B3GALT4O96024 378 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 NID1P14543 1247 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 GPX2P18283 190 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 SDHAP31040 664 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 TSEN54Q7Z6J9 526 aaKnown RBP21.1■□□□□ 0.97
NPAS3-201ENST00000346562 CA13Q8N1Q1 262 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 CCDC74BQ96LY2 380 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 OXGR1Q96P68 337 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 ZNF331Q9NQX6 463 aaPredicted RBP21.1■□□□□ 0.97
NPAS3-201ENST00000346562 SLC22A11Q9NSA0 550 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 A0A087WZY1 265 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 H0Y8X5 98 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 MMP11P24347 488 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 COL16A1Q07092 1604 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms