RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ZNF20P17024 532 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 LUMP51884 338 aaPredicted RBP11.33□□□□□ -0.6
LMX1A-202ENST00000342310 CEBPGP53567 150 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 BDH1Q02338 343 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 GLO1Q04760 184 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 CCDC74AQ96AQ1 378 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 RBP7Q96R05 134 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 S100A13Q99584 98 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 ZNF768Q9H5H4 540 aaKnown RBP11.33□□□□□ -0.6
LMX1A-202ENST00000342310 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 KLHL13Q9P2N7 655 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 RALGAPA1Q6GYQ0 2036 aa11.33□□□□□ -0.6
LMX1A-202ENST00000342310 SYT7O43581 403 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TPOP07202 933 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 DHPSP49366 369 aaPredicted RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TNK1Q13470 666 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 KLF9Q13886 244 aaPredicted RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 KIAA0895LQ68EN5 471 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TIGD3Q6B0B8 471 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TMEM81Q6P7N7 255 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 GKN2Q86XP6 184 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TMEM185AQ8NFB2 350 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 STEAP2Q8NFT2 490 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 DAZLQ92904 295 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ABHD6Q9BV23 337 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 SLC6A15Q9H2J7 730 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ZNF304Q9HCX3 659 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 SERTAD3Q9UJW9 196 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 MOKQ9UQ07 419 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TMEM82A0PJX8 343 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 FARS2O95363 451 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 FOLR1P15328 257 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 HTR2CP28335 458 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 GPR3P46089 330 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 BIDP55957 195 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 OVCH1Q7RTY7 1134 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 GLRX5Q86SX6 157 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 DUSP15Q9H1R2 295 aaPredicted RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ASF1BQ9NVP2 202 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 PCDHGA9Q9Y5G4 932 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 TMEM14AQ9Y6G1 99 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 IGKV1D-42A0A075B6H8 117 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CCDC163A0A0D9SF12 145 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 SC5DO75845 299 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 HEXBP07686 556 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CBR1P16152 277 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 GNB3P16520 340 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CXCL2P19875 107 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CCNOP22674 350 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CD34P28906 385 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 DLX5P56178 289 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 RBMS2Q15434 407 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ZNF704Q6ZNC4 412 aaPredicted RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 OR1J2Q8NGS2 313 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 FLVCR1-AS1Q8TAF5 88 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 MRPL38Q96DV4 380 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 ZDHHC12Q96GR4 267 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 RADILQ96JH8 1075 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 SLC41A2Q96JW4 573 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 METTL8Q9H825 291 aaKnown RBP11.32□□□□□ -0.6
LMX1A-202ENST00000342310 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 STEAP1Q9UHE8 339 aa11.32□□□□□ -0.6
LMX1A-202ENST00000342310 IGHV3-15A0A0B4J1V0 119 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 LOC101059948A0A1B0GTJ6 334 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 GGT3PA6NGU5 568 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 DISC1C4P0D8 188 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 SEC14L5O43304 696 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 SRPX2O60687 465 aaPredicted RBP11.31□□□□□ -0.6
LMX1A-202ENST00000342310 TRIM3O75382 744 aaPredicted RBP11.31□□□□□ -0.6
LMX1A-202ENST00000342310 CFIP05156 583 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 AKAIN1P0CW23 69 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 SMIM10L1P0DMW3 83 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 YPEL5P62699 121 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 IL13RA1P78552 427 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 PDZD9Q8IXQ8 264 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 GALNT16Q8N428 558 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 OR2I1PQ8NGU4 316 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 TCTN2Q96GX1 697 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 SMIM10Q96HG1 83 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 TSNAXQ99598 290 aaKnown RBP11.31□□□□□ -0.6
LMX1A-202ENST00000342310 LMF2Q9BU23 707 aaKnown RBP11.31□□□□□ -0.6
LMX1A-202ENST00000342310 SMIM3Q9BZL3 60 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 KANTRA0A1W2PQU2 76 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 LPLP06858 475 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
LMX1A-202ENST00000342310 TAGLNQ01995 201 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms