RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OR5L2Q8NGL0 311 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ST7LQ8TDW4 575 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 SAP25Q8TEE9 199 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 FAM3DQ96BQ1 224 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 NOX3Q9HBY0 568 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 KLRF1Q9NZS2 232 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 MTFP1Q9UDX5 166 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 SLC23A1Q9UHI7 598 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 LOC100289279A0A1B0GTE1 492 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 CIB4A0PJX0 185 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 LIPT2A6NK58 231 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 H3BML4 177 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 EFNA2O43921 213 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 FSTP19883 344 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 PI4KAP42356 2102 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 SLC25A28Q96A46 364 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 NKX3-1Q99801 234 aaPredicted RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 UTP23Q9BRU9 249 aaKnown RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 POTEKPQ9BYX7 375 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 APMAPQ9HDC9 416 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 G6PC2Q9NQR9 355 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 DIABLOQ9NR28 239 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 TAS2R4Q9NYW5 299 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 PPP4R1LQ9P1A2 415 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 EMC9Q9Y3B6 208 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 KIF26BQ2KJY2 2108 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 TNRC18O15417 2968 aaPredicted RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 RBBP9O75884 186 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 KDM4BO94953 1096 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 NDUFB6O95139 128 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 CD2P06729 351 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 RAD52P43351 418 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 SELENOPP49908 381 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 SLC25A53Q5H9E4 307 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 FAM69BQ5VUD6 431 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 SLC25A25Q6KCM7 469 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 TMEM205Q6UW68 189 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 GLDNQ6ZMI3 551 aaPredicted RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 POC1BQ8TC44 478 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 C5orf34Q96MH7 638 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 CRB3Q9BUF7 120 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 ZNF436Q9C0F3 470 aaPredicted RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 FANCFQ9NPI8 374 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 NPDC1Q9NQX5 325 aaPredicted RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 MYOTQ9UBF9 498 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 CDV3Q9UKY7 258 aaKnown RBP13.03□□□□□ -0.32
TPM3-206ENST00000330188 PCDHGA5Q9Y5G8 931 aa13.03□□□□□ -0.32
TPM3-206ENST00000330188 IGLV3-32A0A0A0MS00 114 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 TMEM272A0A1B0GTI8 110 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 A0A1W2PPC1 479 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 DOK2O60496 412 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 ICMTO60725 284 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 ZFAND5O76080 213 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 AQP8O94778 261 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 CD37P11049 281 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 MSX1P28360 303 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 ZNF41P51814 821 aaPredicted RBP13.02□□□□□ -0.33
TPM3-206ENST00000330188 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 PCGF3Q3KNV8 242 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 OR10G3Q8NGC4 313 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 SLC25A44Q96H78 314 aaPredicted RBP13.02□□□□□ -0.33
TPM3-206ENST00000330188 SEC22CQ9BRL7 303 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 PRMT8Q9NR22 394 aaPredicted RBP13.02□□□□□ -0.33
TPM3-206ENST00000330188 SLC17A5Q9NRA2 495 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 CKLFQ9UBR5 152 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 SCP2D1Q9UJQ7 156 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
TPM3-206ENST00000330188 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 TRAV18A0A075B6X5 111 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 LOC107986453A0A1B0GWG9 222 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 G3V3Q6 166 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 TSC22D2O75157 780 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 OR2J2O76002 312 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 MECP2P51608 486 aaKnown RBP13.01□□□□□ -0.33
TPM3-206ENST00000330188 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 PPP1R3BQ86XI6 285 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 MRGPRX4Q96LA9 322 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 SERINC1Q9NRX5 453 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 KLHL13Q9P2N7 655 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 B3GALT5Q9Y2C3 310 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 WIF1Q9Y5W5 379 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 B3GALT1Q9Y5Z6 326 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 A0A1W2PNV4 684 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 HRGP04196 525 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 ISG15P05161 165 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 ANXA7P20073 488 aaKnown RBP13.01□□□□□ -0.33
TPM3-206ENST00000330188 ACHEP22303 614 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 DNASE1P24855 282 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 BIDP55957 195 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 GUCA2AQ02747 115 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 C19orf57Q0VDD7 668 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 HLA-BQ31612 363 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 LRFN4Q6PJG9 635 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms