RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LSSP48449 732 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ITPRIPL2Q3MIP1 535 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 VWA2Q5GFL6 755 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 EXOSC6Q5RKV6 272 aaKnown RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 PLPP4Q5VZY2 271 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ZNF425Q6IV72 752 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 FBXO42Q6P3S6 717 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 CORO6Q6QEF8 472 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 USP53Q70EK8 1073 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 MDGA2Q7Z553 956 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ZNF584Q8IVC4 421 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 BAP18Q8IXM2 172 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ETFBKMTQ8IXQ9 262 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 OR6S1Q8NH40 331 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 SUSD6Q92537 303 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 RRNAD1Q96FB5 475 aaKnown RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ALX4Q9H161 411 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ELOVL3Q9HB03 270 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 LRIT1Q9P2V4 623 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 EML5Q05BV3 1969 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 SERPINA5P05154 406 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ERCC1P07992 297 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 DAOP14920 347 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 CPT2P23786 658 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 GRK6P43250 576 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 F2RL1P55085 397 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 DCDP81605 110 aaKnown RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 FABP9Q0Z7S8 132 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 MEP1BQ16820 701 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 EIF2S3LQ2VIR3 472 aaKnown RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 KLHL26Q53HC5 615 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 RNASE10Q5GAN6 216 aaKnown RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 SLC35D3Q5M8T2 416 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 ZNF585AQ6P3V2 769 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 PAPD4Q6PIY7 484 aaKnown RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 OR4C3Q8NH37 302 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 PHOSPHO2Q8TCD6 241 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 RPS4Y2Q8TD47 263 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 NUDCD2Q8WVJ2 157 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 SPACA7Q96KW9 195 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 NAA11Q9BSU3 229 aaPredicted RBP8.72□□□□□ -1.01
PTPRA-202ENST00000318266 C20orf24Q9BUV8 137 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 LAT2Q9GZY6 243 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 TAS2R4Q9NYW5 299 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 CNTRLQ7Z7A1 2325 aa8.72□□□□□ -1.01
PTPRA-202ENST00000318266 C11orf98E9PRG8 122 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 SFTA3P0C7M3 94 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 ZNF735P0CB33 412 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 SLC25A4P12235 298 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 PI3P19957 117 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 NME2P22392 152 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 CD80P33681 288 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 SERPINF1P36955 418 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 PSG6Q00889 435 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 TMEM52BQ4KMG9 183 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 ALG10Q5BKT4 473 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 KRBOX4Q5JUW0 171 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 ASPHD2Q6ICH7 369 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 ZNF813Q6ZN06 617 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 ZNF600Q6ZNG1 722 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 RTN4RL2Q86UN3 420 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 BADQ92934 168 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 PHB2Q99623 299 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 NRIP2Q9BQI9 281 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 PRMT8Q9NR22 394 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-202ENST00000318266 SLC22A7Q9Y694 548 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 SZT2Q5T011 3432 aa8.71□□□□□ -1.01
PTPRA-202ENST00000318266 TRBV5-7A0A0A0MS05 114 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 C9orf170A2RU37 121 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 TMEM212A6NML5 194 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 SLC17A2O00624 439 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 PNPP00491 289 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 ADH1AP07327 375 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 RBM34P42696 430 aaKnown RBP8.71□□□□□ -1.02
PTPRA-202ENST00000318266 PMPCAQ10713 525 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 TDGQ13569 410 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 ELOCQ15369 112 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 PRICKLE4Q2TBC4 344 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 LILRA6Q6PI73 481 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 LYG2Q86SG7 212 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 SAMD14Q8IZD0 417 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-202ENST00000318266 FAM174AQ8TBP5 190 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 RAB11FIP5Q9BXF6 653 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.023e-6■■□□□ 13.8
PTPRA-202ENST00000318266 DEC1Q9P2X7 70 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 GRHPRQ9UBQ7 328 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 TINAGQ9UJW2 476 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 TBX21Q9UL17 535 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 CARHSP1Q9Y2V2 147 aaKnown RBP8.71□□□□□ -1.02
PTPRA-202ENST00000318266 MRPS18BQ9Y676 258 aaKnown RBP8.71□□□□□ -1.02
PTPRA-202ENST00000318266 A0A1W2PP55 124 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 COLCA2A8K830 154 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 PRR33A8MZF0 331 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 C1orf196B1AJZ1 125 aa8.71□□□□□ -1.02
PTPRA-202ENST00000318266 FBXO24O75426 580 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms