RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CFAP77Q6ZQR2 320 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 ZNF573Q86YE8 665 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 GLYATL2Q8WU03 294 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 HINT3Q9NQE9 182 aaKnown RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 NLKQ9UBE8 527 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 DLL1O00548 723 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 DEGS1O15121 323 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 PRAF2O60831 178 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 ADH6P28332 368 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 HNRNPFP52597 415 aaKnown RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 KIAA0040Q15053 153 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 CSRP2Q16527 193 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 ANKRD13BQ86YJ7 626 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 JAM3Q9BX67 310 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 PPA2Q9H2U2 334 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 C7orf72A4D263 438 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 TRIM64BA6NI03 449 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 BET1O15155 118 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 CHRM2P08172 466 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 B4GALT1P15291 398 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 CCDC58Q4VC31 144 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 ZNF679Q8IYX0 411 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 OR8H3Q8N146 312 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 AMER3Q8N944 861 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 OR52N5Q8NH56 324 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 SAP25Q8TEE9 199 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 RASL10BQ96S79 203 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 DDA1Q9BW61 102 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 GLTPQ9NZD2 209 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 RAB22AQ9UL26 194 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 TMA7Q9Y2S6 64 aaKnown RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 PRELID3BQ9Y3B1 194 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 RAF1P04049 648 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 DNASE1P24855 282 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 ETV6P41212 452 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 SOX8P57073 446 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 SNRPD2P62316 118 aaKnown RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 UBE2NLQ5JXB2 153 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 OGFOD3Q6PK18 319 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 PAQR6Q6TCH4 344 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 THAP7Q9BT49 309 aaPredicted RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 RANBP3Q9H6Z4 567 aaPredicted RBP12.61□□□□□ -0.39
CDH1-201ENST00000261769 OR2S2Q9NQN1 319 aa12.61□□□□□ -0.39
CDH1-201ENST00000261769 FABP6P51161 128 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 METTL11BQ5VVY1 283 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 RIMKLAQ8IXN7 391 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 ALKBH3Q96Q83 286 aaPredicted RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 HIPK2Q9H2X6 1198 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 UFSP2Q9NUQ7 469 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 ETV7Q9Y603 341 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 UNC13CQ8NB66 2214 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 IFNA1P01562 189 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 GAAP10253 952 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 EDN3P14138 238 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 SRP9P49458 86 aaKnown RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 EDDM3AQ14507 147 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 TMEM81Q6P7N7 255 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 CCBE1Q6UXH8 406 aaPredicted RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 SCCPDHQ8NBX0 429 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 UPRTQ96BW1 309 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 OR14A2Q96R54 314 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 CITED4Q96RK1 184 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 DCLRE1CQ96SD1 692 aaKnown RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 ARHGDIGQ99819 225 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 C12orf4Q9NQ89 552 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 ZNF225Q9UK10 706 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 TMEM129A0AVI4 362 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 FAM90A27PA6NNH2 459 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 H7C2Y5 167 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 FXYD1O00168 92 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 ENSAO43768 121 aaKnown RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 GPR137BO60478 399 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 ACTL6AO96019 429 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 FAM157BP0CG42 384 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 TNFRSF1AP19438 455 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 CAV2P51636 162 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 EGR3Q06889 387 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 GALEQ14376 348 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 FAM76BQ5HYJ3 339 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 NHSL2Q5HYW2 709 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 USP51Q70EK9 711 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
CDH1-201ENST00000261769 RAB33BQ9H082 229 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 KCNJ16Q9NPI9 418 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 GPATCH2Q9NW75 528 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 PTGER4P35408 488 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 MDGA2Q7Z553 956 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 NOXO1Q8NFA2 376 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 HSPB11Q9Y547 144 aa12.6□□□□□ -0.39
CDH1-201ENST00000261769 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 RP2O75695 350 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TMIGD3P0DMS9 266 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms