RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 BRF2Q9HAW0 419 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMAD4-209ENST00000589941 DNAJC11Q9NVH1 559 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ARL15Q9NXU5 204 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ENOPH1Q9UHY7 261 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ATP6V1HQ9UI12 483 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 POU2F3Q9UKI9 436 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 PROCRQ9UNN8 238 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 LSM2Q9Y333 95 aaKnown RBP6.75□□□□□ -1.33
SMAD4-209ENST00000589941 U3KQV3 271 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 DSPPQ9NZW4 1301 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 FAM172BPA6NC97 362 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 EFCAB10A6NFE3 127 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 DPRXA6NFQ7 191 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 C17orf51A8MQB3 221 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CENPBD1B2RD01 187 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 hCG_2039718K7EN88 272 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 SCO2O43819 266 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 MPZL2O60487 215 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 UGT2B17O75795 530 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF682O95780 498 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 GUCA1CO95843 209 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CLPSP04118 112 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 SPNP16150 400 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CBLP22681 906 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CERS1P27544 350 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ASMTP46597 345 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 RPS5P46782 204 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CLK1P49759 484 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 LSM3P62310 102 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 SKP1P63208 163 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 SELENOWP63302 87 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 RAE1P78406 368 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 RGS1Q08116 209 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 PDE7AQ13946 482 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 DGCR6Q14129 220 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 TIMM50Q3ZCQ8 353 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ANXA8L1Q5VT79 327 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 TIGD3Q6B0B8 471 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 GRHL2Q6ISB3 625 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 B3GLCTQ6Y288 498 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF793Q6ZN11 406 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 UBQLNLQ8IYU4 475 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 PRR22Q8IZ63 422 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 POC5Q8NA72 575 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ATG16L2Q8NAA4 619 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 C11orf65Q8NCR3 313 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 OR5L2Q8NGL0 311 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CLHC1Q8NHS4 586 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 FNDC9Q8TBE3 224 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 SPPL2AQ8TCT8 520 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF675Q8TD23 568 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 DAZLQ92904 295 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 TMEM41AQ96HV5 264 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 EGLN2Q96KS0 407 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ADAD1Q96M93 576 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 C1QTNF5Q9BXJ0 243 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ELOVL6Q9H5J4 265 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 TMEM38AQ9H6F2 299 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 RNF122Q9H9V4 155 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 TPT1P8Q9HAU6 139 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 SLC25A19Q9HC21 320 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ADPRHL2Q9NX46 363 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CISD1Q9NZ45 108 aaKnown RBP6.74□□□□□ -1.33
SMAD4-209ENST00000589941 NDUFAF4Q9P032 175 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 KIF17Q9P2E2 1029 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF229Q9UJW7 825 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CLEC4AQ9UMR7 237 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
SMAD4-209ENST00000589941 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TRBC2A0A5B9 178 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 AQP8O94778 261 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 LGI1O95970 557 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 PTHP01270 115 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 C1QCP02747 245 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 PRB2P02812 416 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 IL6RP08887 468 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 CD22P20273 847 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 C21orf33P30042 268 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 S100A5P33763 92 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TGFBR1P36897 503 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 HSD17B2P37059 387 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 DDOSTP39656 456 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 ARL1P40616 181 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 PTGDSP41222 190 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 HTR3AP46098 478 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 PRIM2P49643 509 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 DEFA1P59665 94 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 DEFA3P59666 94 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 SNRPGP62308 76 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 EEF1A1P68104 462 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 BTN3A2P78410 334 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 SRSF4Q08170 494 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 GPR50Q13585 617 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 EBPQ15125 230 aaKnown RBP6.73□□□□□ -1.33
SMAD4-209ENST00000589941 RGNQ15493 299 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 TAB1Q15750 504 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 MICAQ29983 383 aa6.73□□□□□ -1.33
SMAD4-209ENST00000589941 IFI44LQ53G44 452 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms