RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 OR4F15Q8NGB8 312 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR11G2Q8NGC1 345 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR4K1Q8NGD4 311 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR4D11Q8NGI4 311 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR6K3Q8NGY3 331 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR4Q3Q8NH05 313 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR5AK3PQ8NH89 298 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 BRIX1Q8TDN6 353 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 FAM222BQ8WU58 562 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SLC38A5Q8WUX1 472 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SKA2Q8WVK7 121 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ASZ1Q8WWH4 475 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ST8SIA2Q92186 375 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SMPDL3AQ92484 453 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PHYHIPQ92561 330 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RSC1A1Q92681 617 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 DIO2Q92813 273 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PIGTQ969N2 578 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MOAP1Q96BY2 351 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ECHDC3Q96DC8 303 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 LRRC46Q96FV0 321 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 C1orf159Q96HA4 380 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 NARS2Q96I59 477 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ZNF514Q96K75 400 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 LRFN5Q96NI6 719 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ABHD1Q96SE0 405 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CCL19Q99731 98 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ARHGDIGQ99819 225 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 TCEAL7Q9BRU2 100 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 DPH7Q9BTV6 452 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ALG8Q9BVK2 526 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 MS4A7Q9GZW8 240 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ATG10Q9H0Y0 220 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PIGMQ9H3S5 423 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SAV1Q9H4B6 383 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ZCCHC4Q9H5U6 513 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RERGLQ9H628 205 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 EGLN3Q9H6Z9 239 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MVB12BQ9H7P6 319 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CXorf36Q9H7Y0 433 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 CACYBPQ9HB71 228 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 EXOSC3Q9NQT5 275 aaKnown RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 CTPS2Q9NRF8 586 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SIRT3Q9NTG7 399 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 ACSS1Q9NUB1 689 aaPredicted RBP3.74□□□□□ -1.81
LIG3-211ENST00000588713 BABAM2Q9NXR7 383 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 COA4Q9NYJ1 87 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 KLHL9Q9P2J3 617 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 MBD2Q9UBB5 411 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OPN4Q9UHM6 478 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 GPR160Q9UJ42 338 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PLCL2Q9UPR0 1127 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 SLC6A5Q9Y345 797 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 PPIL1Q9Y3C6 166 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 OR51B4Q9Y5P0 310 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 ETV7Q9Y603 341 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 USF3Q68DE3 2245 aa3.74□□□□□ -1.81
LIG3-211ENST00000588713 RYR1P21817 5038 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 IGHV5-51A0A0C4DH38 117 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 C2orf92A0A1B0GVN3 265 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 A0A1W2PPR1 153 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 TMEM82A0PJX8 343 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 ANKRD20A5PA0PJZ0 165 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 GSAPA4D1B5 854 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 RAB19A4D1S5 217 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 NPIPB15A6NHN6 443 aaPredicted RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 SLC22A31A6NKX4 558 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 ZNF879B4DU55 563 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 F5H5P2 479 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 M0R3H8 397 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 HMGN4O00479 90 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 ARPC1BO15143 372 aaKnown RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 PGRMC2O15173 223 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 TMPRSS2O15393 492 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 GATBO75879 557 aaKnown RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 OR5F1O95221 314 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 CLDN7O95471 211 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 CBX7O95931 251 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 HPXP02790 462 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 ATP1B1P05026 303 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 CEACAM5P06731 702 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 CHRM5P08912 532 aaPredicted RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 CD3GP09693 182 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 UCHL1P09936 223 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 TMIGD3P0DMS9 266 aaPredicted RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 C1GALT1C1LP0DN25 315 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 ATP1B2P14415 290 aaPredicted RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 MGMTP16455 207 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 ATP5A1P25705 553 aaKnown RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 MPGP29372 298 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 AGTR1P30556 359 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 RFC3P40938 356 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 OMPP47874 163 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 SRP9P49458 86 aaKnown RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 PRLHRP49683 370 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 CTSCP53634 463 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 PSMD4P55036 377 aaKnown RBP3.73□□□□□ -1.81
LIG3-211ENST00000588713 OR10A3P58181 314 aa3.73□□□□□ -1.81
LIG3-211ENST00000588713 TAS2R41P59536 307 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms