RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PATL1Q86TB9 770 aaKnown RBP12.24□□□□□ -0.45
SDF2-202ENST00000585428 SLC30A8Q8IWU4 369 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 NOXO1Q8NFA2 376 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 VANGL1Q8TAA9 524 aaPredicted RBP12.24□□□□□ -0.45
SDF2-202ENST00000585428 SLC25A40Q8TBP6 338 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 C22orf15Q8WYQ4 148 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 TAMM41Q96BW9 452 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 CGREF1Q99674 301 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 GAL3ST1Q99999 423 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 OR2J1Q9GZK6 312 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 KCNN2Q9H2S1 579 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 NANOGQ9H9S0 305 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 SMURF2Q9HAU4 748 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 MMP26Q9NRE1 261 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 INIPQ9NRY2 104 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 CYSLTR2Q9NS75 346 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 DDX28Q9NUL7 540 aaKnown RBP12.24□□□□□ -0.45
SDF2-202ENST00000585428 ZDHHC8Q9ULC8 765 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 PCDHGB1Q9Y5G3 927 aa12.24□□□□□ -0.45
SDF2-202ENST00000585428 PLSCR5A0PG75 271 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 C5orf49A4QMS7 147 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 ZSCAN5BA6NJL1 495 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 OR7A10O76100 309 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 SLC2A10O95528 541 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 NGFP01138 241 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 CD55P08174 381 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 MTPNP58546 118 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 CYP51A1Q16850 503 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 SLC25A47Q6Q0C1 308 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 UNQ6126/PRO20091Q6UXV3 157 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 CCDC80Q76M96 950 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 NKAIN4Q8IVV8 208 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 AKR7LQ8NHP1 331 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
SDF2-202ENST00000585428 HDAC2Q92769 488 aaKnown RBP12.23□□□□□ -0.45
SDF2-202ENST00000585428 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 EGLN1Q9GZT9 426 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 RABEP2Q9H5N1 569 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 CCNB1IP1Q9NPC3 277 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 C20orf141Q9NUB4 165 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 NDUFAF1Q9Y375 327 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 PPIAL4AQ9Y536 164 aa12.23□□□□□ -0.45
SDF2-202ENST00000585428 NPIPB13A6NJU9 1138 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 NPIPB4C9JG80 1138 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 TRAPPC2LH3BP13 241 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 FOXH1O75593 365 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 IGHV2-70P01814 119 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 PRTN3P24158 256 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 RBM34P42696 430 aaKnown RBP12.22□□□□□ -0.45
SDF2-202ENST00000585428 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
SDF2-202ENST00000585428 DAP3P51398 398 aaKnown RBP12.22□□□□□ -0.45
SDF2-202ENST00000585428 CDK5R2Q13319 367 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 SGCAQ16586 387 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 DOK3Q7L591 496 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 HDDC2Q7Z4H3 204 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 DHDDSQ86SQ9 333 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 MOSPD2Q8NHP6 518 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 TSPEARQ8WU66 669 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 TMEM255BQ8WV15 326 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 POP5Q969H6 163 aaKnown RBP12.22□□□□□ -0.45
SDF2-202ENST00000585428 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 TXNIPQ9H3M7 391 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 NPHS2Q9NP85 383 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
SDF2-202ENST00000585428 CGGBP1Q9UFW8 167 aaPredicted RBP12.22□□□□□ -0.45
SDF2-202ENST00000585428 EGFL7Q9UHF1 273 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 NUP50Q9UKX7 468 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 NPTNQ9Y639 398 aa12.22□□□□□ -0.45
SDF2-202ENST00000585428 MCIDASD6RGH6 385 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 H3BSA7 217 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 SBK2P0C263 348 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 PCGF2P35227 344 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 RBMXP38159 391 aaKnown RBP12.21□□□□□ -0.45
SDF2-202ENST00000585428 SLC6A9P48067 706 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 PPP1CBP62140 327 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 ERVK-25P63136 954 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 FMODQ06828 376 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 ZNF154Q13106 437 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 KLF17Q5JT82 389 aaPredicted RBP12.21□□□□□ -0.45
SDF2-202ENST00000585428 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.45
SDF2-202ENST00000585428 OR10A6Q8NH74 314 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 ST7LQ8TDW4 575 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 SLC26A7Q8TE54 656 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 TMEM239Q8WW34 195 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 RASSF5Q8WWW0 418 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 NSMAFQ92636 917 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 SGTBQ96EQ0 304 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 C4orf45Q96LM5 186 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 C1orf147Q96MC9 270 aaPredicted RBP12.21□□□□□ -0.45
SDF2-202ENST00000585428 C1QTNF5Q9BXJ0 243 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 OR2H1Q9GZK4 316 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 MSL2Q9HCI7 577 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 PLEK2Q9NYT0 353 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 UBAP1Q9NZ09 502 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 ZNF69Q9UC07 566 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 RIMS3Q9UJD0 308 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms