RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CAV2P51636 162 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 SCAND1P57086 179 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ELOCQ15369 112 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MOGAT2Q3SYC2 334 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 RNF212Q495C1 297 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 CDNFQ49AH0 187 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 OR2B11Q5JQS5 317 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 LRRC69Q6ZNQ3 347 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 SLC25A42Q86VD7 318 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ZNF761Q86XN6 746 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 ZNF561Q8N587 486 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ZSCAN4Q8NAM6 433 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 NUDCD2Q8WVJ2 157 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 PPP1R14AQ96A00 147 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 AKR1E2Q96JD6 320 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 LRFN5Q96NI6 719 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 EGLN1Q9GZT9 426 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MYOZ1Q9NP98 299 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 LAMP5Q9UJQ1 280 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 GTF2A1LQ9UNN4 478 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 MSGN1A6NI15 193 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 GRXCR1A8MXD5 290 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 LY86O95711 162 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 CRHP06850 196 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 CD1CP29017 333 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 PEBP1P30086 187 aaKnown RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 ID4P47928 161 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ADAM8P78325 824 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 SSBP1Q04837 148 aaKnown RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 ZNF585AQ6P3V2 769 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ZNF765Q7L2R6 523 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ZNF595Q8IYB9 648 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 WDSUB1Q8N9V3 476 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 BHLHE23Q8NDY6 225 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 OR52E1Q8NGJ3 308 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MITD1Q8WV92 249 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MCHR2Q969V1 340 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 COX14Q96I36 57 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 TCEAL7Q9BRU2 100 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 MKKSQ9NPJ1 570 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 C19orf53Q9UNZ5 99 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 OR1A2Q9Y585 309 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
SMG6-215ENST00000574501 UNC80Q8N2C7 3258 aa13.03□□□□□ -0.32
SMG6-215ENST00000574501 SLC17A2O00624 439 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 CCL16O15467 120 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 BRINP1O60477 761 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 ERCC1P07992 297 aaPredicted RBP13.02□□□□□ -0.32
SMG6-215ENST00000574501 CPMP14384 443 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 DAOP14920 347 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 AGAP20933 346 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 SERPINF1P36955 418 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 HGFACQ04756 655 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 FAM53BQ14153 422 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 ALG11Q2TAA5 492 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 SLC22A6Q4U2R8 563 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 FAM76BQ5HYJ3 339 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 DHRS11Q6UWP2 260 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 RNF44Q7L0R7 432 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 DPY19L4Q7Z388 723 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 CACUL1Q86Y37 369 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 OR6N2Q8NGY6 317 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 FAM174AQ8TBP5 190 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 NKD1Q969G9 470 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 PFDN5Q99471 154 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 RNF126Q9BV68 326 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 WDR76Q9H967 626 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 CGGBP1Q9UFW8 167 aaPredicted RBP13.02□□□□□ -0.32
SMG6-215ENST00000574501 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.32
SMG6-215ENST00000574501 hCG_1809904A0A1W2PP81 198 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 A0A1W2PR64 198 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 A0A1W2PRV1 198 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 KLK3P07288 261 aaPredicted RBP13.02□□□□□ -0.33
SMG6-215ENST00000574501 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
SMG6-215ENST00000574501 NME2P22392 152 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 KIR3DL2P43630 455 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 LPAR6P43657 344 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 PPICP45877 212 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 OR2B8PP59922 312 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 CDK3Q00526 305 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 RUNX2Q13950 521 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 TCEA2Q15560 299 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 NCMAPQ5T1S8 102 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 PAPD4Q6PIY7 484 aaKnown RBP13.02□□□□□ -0.33
SMG6-215ENST00000574501 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 GVQW1Q8N7I0 195 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 SULT4A1Q9BR01 284 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 ZDHHC4Q9NPG8 344 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
SMG6-215ENST00000574501 MRPS33Q9Y291 106 aaKnown RBP13.02□□□□□ -0.33
SMG6-215ENST00000574501 SLC27A6Q9Y2P4 619 aa13.02□□□□□ -0.33
SMG6-215ENST00000574501 NUP210LQ5VU65 1888 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms