RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 UBE2FQ969M7 185 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 ARHGDIGQ99819 225 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 WFDC6Q9BQY6 131 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 NANOGQ9H9S0 305 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 SIAEQ9HAT2 523 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 SSU72Q9NP77 194 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 SLCO1B3Q9NPD5 702 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 KLHL21Q9UJP4 597 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF229Q9UJW7 825 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 LRCH1Q9Y2L9 728 aa9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 SOX21Q9Y651 276 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-209ENST00000568569 LOC100509620A0A075B734 347 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 MDFIC2A0A1B0GVS7 189 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 CENPBD1B2RD01 187 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 SRRM5B3KS81 715 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 MCIDASD6RGH6 385 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 TIMM8AO60220 97 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 FMO6PO60774 539 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 SERPINB7O75635 380 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 TGDSO95455 350 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 NGFP01138 241 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 HIST1H2ABP04908 130 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF32P17041 273 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 HOXB9P17482 250 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 TNFRSF1AP19438 455 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 MDH2P40926 338 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 MRPS34P82930 218 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 CDK5R2Q13319 367 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 ZMYND11Q15326 602 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 SLC2A7Q6PXP3 512 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 LRRN1Q6UXK5 716 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 RHOUQ7L0Q8 258 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 HIST3H2AQ7L7L0 130 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 HDDC2Q7Z4H3 204 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 AKR7LQ8NHP1 331 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 HIST1H2ACQ93077 130 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 THOC1Q96FV9 657 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 SAMD8Q96LT4 415 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF607Q96SK3 696 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 SEPHS2Q99611 448 aa9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 SSBP3Q9BWW4 388 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 MRPL13Q9BYD1 178 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-209ENST00000568569 CLPSL1A2RUU4 121 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 CEACAM18A8MTB9 384 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 ICMTO60725 284 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 NDUFA7O95182 113 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 ASAH2BP0C7U1 165 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 KITP10721 976 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 UMPSP11172 480 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 CPT2P23786 658 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 SLC6A2P23975 617 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 AQP1P29972 269 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 CDAP32320 146 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 DAP3P51398 398 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 ARHGDIAP52565 204 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 ZNF133P52736 654 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 PSG4Q00888 419 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 PAX2Q02962 417 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 SCARB2Q14108 478 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 TAF11Q15544 211 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 FAM205BPQ63HN1 556 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 TTC33Q6PID6 262 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 FIP1L1Q6UN15 594 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 NANOGNBQ7Z5D8 188 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 ARMC8Q8IUR7 673 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 MUC20Q8N307 709 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 C10orf111Q8N326 155 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 MAELQ96JY0 434 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 SIGLEC11Q96RL6 698 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 MCHR1Q99705 422 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 RBM4BQ9BQ04 359 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 TMEM109Q9BVC6 243 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 PRDM13Q9H4Q3 707 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 TMEM38AQ9H6F2 299 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 SMURF2Q9HAU4 748 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 ELOVL3Q9HB03 270 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 SLC25A37Q9NYZ2 338 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 C1RLQ9NZP8 487 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 STX18Q9P2W9 335 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 PPP1R3CQ9UQK1 317 aa9.9□□□□□ -0.82
GTF3C1-209ENST00000568569 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 A0A1W2PRG6 482 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 BLOC1S5-TXNDC5H3BN57 136 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 M0R3H8 397 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 KPNA4O00629 521 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 SURF4O15260 269 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 RGS16O15492 202 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 TRMUO75648 421 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 SLC2A10O95528 541 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ACADSP16219 412 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 GSTM3P21266 225 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 PPIBP23284 216 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 RBMXP38159 391 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 ERVK-25P63136 954 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 RELBQ01201 579 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 PSG7Q13046 419 aa9.89□□□□□ -0.83
GTF3C1-209ENST00000568569 PDCD1Q15116 288 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms