RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ARHGDIGQ99819 225 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 MRPL13Q9BYD1 178 aaKnown RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 BCL2L14Q9BZR8 327 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 OR2J1Q9GZK6 312 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 MS4A7Q9GZW8 240 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 RABEP2Q9H5N1 569 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 TPT1P8Q9HAU6 139 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 A4GALTQ9NPC4 353 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 B3GAT2Q9NPZ5 323 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 DECR2Q9NUI1 292 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 TMEM106BQ9NUM4 274 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 TET2Q6N021 2002 aaPredicted RBP8.65□□□□□ -1.02
SF3B3-204ENST00000563739 A0A1B0GUS0 222 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 C11orf98E9PRG8 122 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 TPD52L2O43399 206 aaKnown RBP8.65□□□□□ -1.02
SF3B3-204ENST00000563739 MELTFP08582 738 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 WNT2P09544 360 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 SBK2P0C263 348 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 IDO1P14902 403 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
SF3B3-204ENST00000563739 PRKAR1BP31321 381 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 IDH3AP50213 366 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 CDH12P55289 794 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 BTG1P62324 171 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 CDK5R2Q13319 367 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 NPTX1Q15818 432 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 TBC1D28Q2M2D7 210 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 PABPC1L2AQ5JQF8 200 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 FAM91A1Q658Y4 838 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 DHRS4L2Q6PKH6 230 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 Q6YL49 198 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 SLC35D2Q76EJ3 337 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 OR5J2Q8NH18 312 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 STON2Q8WXE9 905 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 DCLRE1CQ96SD1 692 aaKnown RBP8.65□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF347Q96SE7 839 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 EBF4Q9BQW3 602 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 SIKE1Q9BRV8 207 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 TMEM43Q9BTV4 400 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 MRI1Q9BV20 369 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 PAIP1Q9H074 479 aaKnown RBP8.65□□□□□ -1.02
SF3B3-204ENST00000563739 BEX1Q9HBH7 125 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 TNFRSF19Q9NS68 423 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 CALML5Q9NZT1 146 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 GPR160Q9UJ42 338 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 IFT52Q9Y366 437 aa8.65□□□□□ -1.02
SF3B3-204ENST00000563739 C22orf46C9J442 243 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 EBAG9O00559 213 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 RFXANKO14593 260 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 FCN3O75636 299 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 KRT75O95678 551 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 QDPRP09417 244 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF32P17041 273 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 CRATP43155 626 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 ANXA11P50995 505 aaKnown RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 MMP16P51512 607 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 HOXA4Q00056 320 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 PSG7Q13046 419 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 OR1Q1Q15612 314 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 PDCD4Q53EL6 469 aaKnown RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF362Q5T0B9 420 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 C10orf128Q5T292 105 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 C17orf107Q6ZR85 190 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 SLC16A14Q7RTX9 510 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 CPLX4Q7Z7G2 160 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 TRIML2Q8N7C3 387 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 RBM15BQ8NDT2 890 aaKnown RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 OR4D11Q8NGI4 311 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 OR10S1Q8NGN2 331 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 OR9I1Q8NGQ6 314 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 OR4F5Q8NH21 305 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 AKR7LQ8NHP1 331 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 DNAJA4Q8WW22 397 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 MCHR2Q969V1 340 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 THOC1Q96FV9 657 aaKnown RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 SLC25A44Q96H78 314 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-204ENST00000563739 DIRC2Q96SL1 478 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 CCDC28BQ9BUN5 200 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 CDADC1Q9BWV3 514 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 ASPNQ9BXN1 380 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 WNT5BQ9H1J7 359 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 C1orf198Q9H425 327 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 FGFR1OP2Q9NVK5 253 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 SLC25A37Q9NYZ2 338 aa8.64□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF726A6NNF4 738 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 TIMM23O14925 209 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 UBDO15205 165 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 SLC2A10O95528 541 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 VIMP08670 466 aaKnown RBP8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ADORA3P0DMS8 318 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 MMP9P14780 707 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 CDAP32320 146 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 MTNR1AP48039 350 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 MRPL19P49406 292 aaKnown RBP8.63□□□□□ -1.03
SF3B3-204ENST00000563739 SELENOVP59797 346 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 FMODQ06828 376 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 RGNQ15493 299 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF74Q16587 644 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 TAF9Q16594 264 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 NRN1LQ496H8 165 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms