RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 A0A1B0GX12 115 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 C5orf49A4QMS7 147 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 SRRM5B3KS81 715 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 MGRN1O60291 552 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 NGFP01138 241 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 IGHG1P01857 330 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 CD55P08174 381 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 NUDT7P0C024 238 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 TNFRSF1AP19438 455 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 PPIBP23284 216 aaKnown RBP14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 CD80P33681 288 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 GDI2P50395 445 aaKnown RBP14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 STX1BP61266 288 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 PDCD1Q15116 288 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 GTDC1Q4AE62 458 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 FAM205BPQ63HN1 556 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 LRRC28Q86X40 367 aaPredicted RBP14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 GOLGA6L1Q8N7Z2 621 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 MSL2Q9HCI7 577 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 DCAF16Q9NXF7 216 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 LRCH1Q9Y2L9 728 aa14.99□□□□□ -0.01
TSPAN3-208ENST00000560514 DOCK11Q5JSL3 2073 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 TIMM8AO60220 97 aaPredicted RBP14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 PLATP00750 562 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 HIST1H2ABP04908 130 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 PGA4P0DJD7 388 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 PGA3P0DJD8 388 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 TAF9Q16594 264 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 LRIF1Q5T3J3 769 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 SWT1Q5T5J6 900 aaKnown RBP14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 DHRS4L2Q6PKH6 230 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 BLOC1S3Q6QNY0 202 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 HIST3H2AQ7L7L0 130 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 ZER1Q7Z7L7 766 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 RANBP3LQ86VV4 465 aaPredicted RBP14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 ZNF101Q8IZC7 436 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 MUC20Q8N307 709 aaPredicted RBP14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 OR9I1Q8NGQ6 314 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 ABHD4Q8TB40 342 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 HIST1H2ACQ93077 130 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 MCHR2Q969V1 340 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 UPRTQ96BW1 309 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 THOC1Q96FV9 657 aaKnown RBP14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 SSBP3Q9BWW4 388 aaPredicted RBP14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 NANSQ9NR45 359 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 C1RLQ9NZP8 487 aa14.98□□□□□ -0.01
TSPAN3-208ENST00000560514 H3BSA7 217 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 POLR3GO15318 223 aaPredicted RBP14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 NDUFA7O95182 113 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 MMP7P09237 267 aaPredicted RBP14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 HOXB9P17482 250 aaPredicted RBP14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 MDH2P40926 338 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 IDH3AP50213 366 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 ARHGDIAP52565 204 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 CDH12P55289 794 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 PPP1CBP62140 327 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 HLXQ14774 488 aaPredicted RBP14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 DEFB112Q30KQ8 113 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 MTX3Q5HYI7 312 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 RHOUQ7L0Q8 258 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 FUNDC1Q8IVP5 155 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 ZNF283Q8N7M2 679 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 BHLHE22Q8NFJ8 381 aaPredicted RBP14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 OR10S1Q8NGN2 331 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 NFKBIDQ8NI38 313 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 SAMD8Q96LT4 415 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 ARHGDIGQ99819 225 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 EVA1AQ9H8M9 152 aa14.97□□□□□ -0.01
TSPAN3-208ENST00000560514 PRORSD1PA6NEY8 169 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 SLC22A31A6NKX4 558 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 MCIDASD6RGH6 385 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 F5H0A9 414 aaPredicted RBP14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 CH25HO95992 272 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 UMPSP11172 480 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 WNT5AP41221 380 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 GNB2P62879 340 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 ZMYND11Q15326 602 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 SPRNQ5BIV9 151 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 GPR157Q5UAW9 335 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 ASPHD2Q6ICH7 369 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 SLC2A7Q6PXP3 512 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 BRD3OSQ6XYD6 125 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 LRRC8CQ8TDW0 803 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 SPDL1Q96EA4 605 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 PLEKHA8Q96JA3 519 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 POM121L2Q96KW2 1035 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 ZNF347Q96SE7 839 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 TMEM38AQ9H6F2 299 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 MARCH7Q9H992 704 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 SIAEQ9HAT2 523 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 ELOVL3Q9HB03 270 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 NOX4Q9NPH5 578 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 CORO2BQ9UQ03 480 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 PPP1R3CQ9UQK1 317 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 RNF114Q9Y508 228 aa14.96□□□□□ -0.01
TSPAN3-208ENST00000560514 CEACAM18A8MTB9 384 aa14.95□□□□□ -0.02
TSPAN3-208ENST00000560514 SURF4O15260 269 aa14.95□□□□□ -0.02
TSPAN3-208ENST00000560514 TPST1O60507 370 aa14.95□□□□□ -0.02
TSPAN3-208ENST00000560514 RPS2P15880 293 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms