RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 LRRC18Q8N456 261 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 C10orf53Q8N6V4 93 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 ATG16L2Q8NAA4 619 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 NPRL2Q8WTW4 380 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 TXNDC15Q96J42 360 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 C1orf50Q9BV19 199 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 SLC38A1Q9H2H9 487 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 RANBP3Q9H6Z4 567 aaPredicted RBP7.99□□□□□ -1.13
SMAD3-211ENST00000559460 GLTPQ9NZD2 209 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 ZMAT5Q9UDW3 170 aaKnown RBP7.99□□□□□ -1.13
SMAD3-211ENST00000559460 NOTCH3Q9UM47 2321 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 TENM2Q9NT68 2774 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 TRAV36DV7A0A075B6V5 113 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 A0A087WUJ7 227 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 CDHR4A6H8M9 788 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 PEX11AO75192 247 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 OR6A2O95222 327 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 CPSF4O95639 269 aaKnown RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 CD28P10747 220 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 HOXD3P31249 432 aaPredicted RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ACAA2P42765 397 aaKnown RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 KRTAP10-11P60412 298 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 COX10Q12887 443 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 PDCD4Q53EL6 469 aaKnown RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 PABPC1L2AQ5JQF8 200 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 KRTCAP2Q8N6L1 136 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ANKFN1Q8N957 763 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 FNDC5Q8NAU1 212 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 PAPD5Q8NDF8 572 aaKnown RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 WFDC9Q8NEX5 89 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 OR52P1PQ8NH57 321 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF420Q8TAQ5 688 aaPredicted RBP7.98□□□□□ -1.13
SMAD3-211ENST00000559460 TAAR8Q969N4 342 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF566Q969W8 418 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 EPYCQ99645 322 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 CHID1Q9BWS9 393 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 NPFFR1Q9GZQ6 430 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 GCM1Q9NP62 436 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 SELENONQ9NZV5 590 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF180Q9UJW8 692 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
SMAD3-211ENST00000559460 A0A1B0GVI7 797 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 A0A1W2PRX2 142 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 ELOVL7A1L3X0 281 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RBMY1BA6NDE4 496 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RBMY1EA6NEQ0 496 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 C11orf98E9PRG8 122 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 MS4A18H0YCH9 400 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RNASET2O00584 256 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 OPN1SWP03999 348 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RBMY1DP0C7P1 496 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RPS4Y1P22090 263 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 SLC6A2P23975 617 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RPL4P36578 427 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 WNT5AP41221 380 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 SRP9P49458 86 aaKnown RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 ARF6P62330 175 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 EGR4Q05215 589 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 C2orf54Q08AI8 447 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 KCNJ8Q15842 424 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 MS4A18Q3C1V0 323 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 TMEM255AQ5JRV8 349 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 CEP85LQ5SZL2 805 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 OR4F3Q6IEY1 312 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF836Q6ZNA1 936 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RNF165Q6ZSG1 346 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 RFPL4BQ6ZWI9 263 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 CALHM3Q86XJ0 350 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 CREG2Q8IUH2 290 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 LRRC34Q8IZ02 419 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 ALDH16A1Q8IZ83 802 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 CCDC63Q8NA47 563 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 NPEPL1Q8NDH3 523 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 SDR9C7Q8NEX9 313 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 NKX3-1Q99801 234 aaPredicted RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 CITED2Q99967 270 aaPredicted RBP7.97□□□□□ -1.13
SMAD3-211ENST00000559460 SLC35A5Q9BS91 424 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 FAM234AQ9H0X4 552 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 SEMA6AQ9H2E6 1030 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 TNFRSF12AQ9NP84 129 aa7.97□□□□□ -1.13
SMAD3-211ENST00000559460 H3BUX3 64 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 HMGN4O00479 90 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 HPRP00739 348 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 QDPRP09417 244 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 CLRN1P58418 232 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 TXNL4AP83876 142 aaKnown RBP7.96□□□□□ -1.14
SMAD3-211ENST00000559460 PSG7Q13046 419 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 IL23RQ5VWK5 629 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 LYPD2Q6UXB3 125 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 ZYG11AQ6WRX3 759 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 VMO1Q7Z5L0 202 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 PXKQ7Z7A4 578 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 CMTM4Q8IZR5 234 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 TRIML2Q8N7C3 387 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 OR6X1Q8NH79 312 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 TWIST2Q8WVJ9 160 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 TMEM54Q969K7 222 aa7.96□□□□□ -1.14
SMAD3-211ENST00000559460 POM121L2Q96KW2 1035 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms