RNA–Protein interactions for RNA: ENST00000558452.1

RNF31-206, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-206	ENST00000558452	SEC23B	Q15437	767 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	CLEC12B	Q2HXU8	276 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	CLEC9A	Q6UXN8	241 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	HIST3H2A	Q7L7L0	130 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	SLC46A3	Q7Z3Q1	461 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	CCDC36	Q8IYA8	594 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	TMEM239	Q8WW34	195 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	HIST1H2AC	Q93077	130 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	ADAD1	Q96M93	576 aa	Known RBP	11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	KATNB1	Q9BVA0	655 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	CACNG6	Q9BXT2	260 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	MOV10	Q9HCE1	1003 aa	Known RBP	11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	B3GAT2	Q9NPZ5	323 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	GDF2	Q9UK05	429 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	MED31	Q9Y3C7	131 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	ACAN	P16112	2415 aa		11.18	□□□□□ -0.62
RNF31-206	ENST00000558452	PLCE1	Q9P212	2302 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SMIM31	A0A1B0GVY4	71 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	TRIM64C	A6NLI5	447 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SNTN	A6NMZ2	147 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452		H3BN98	237 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SMAD7	O15105	426 aa	Known RBP	11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	RNF13	O43567	381 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SEC14L2	O76054	403 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	CLIC3	O95833	236 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	CRYAA	P02489	173 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	CECR9	P0C854	216 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	CBR1	P16152	277 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	FUT1	P19526	365 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	CRHBP	P24387	322 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	ACVR1B	P36896	505 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	OMP	P47874	163 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	NAAA	Q02083	359 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	TNK1	Q13470	666 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SLX4IP	Q5VYV7	408 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SLC35D2	Q76EJ3	337 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	ZNF627	Q7L945	461 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	ZER1	Q7Z7L7	766 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	OR6N1	Q8NGY5	312 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	OR6X1	Q8NH79	312 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	PFN4	Q8NHR9	129 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	TEX47	Q8TBZ9	253 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	TMEM255B	Q8WV15	326 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	KCNS3	Q9BQ31	491 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	ULBP2	Q9BZM5	246 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	BARX1	Q9HBU1	254 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SLC25A19	Q9HC21	320 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	PLCXD1	Q9NUJ7	323 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	REV1	Q9UBZ9	1251 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	SNX5	Q9Y5X3	404 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	CR1	P17927	2039 aa		11.17	□□□□□ -0.62
RNF31-206	ENST00000558452	ARFGEF3	Q5TH69	2177 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	ZNF503-AS2	A6NEH8	195 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	BLOC1S5-TXNDC5	H3BN57	136 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	OR7A10	O76100	309 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	LY6G6D	O95868	133 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	HEXA	P06865	529 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	ARR3	P36575	388 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	POLR2I	P36954	125 aa	Known RBP	11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	CSNK1A1	P48729	337 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	SNRPG	P62308	76 aa	Known RBP	11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	PRKCD	Q05655	676 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	MELK	Q14680	651 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	MEDAG	Q5VYS4	303 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	ZNF773	Q6PK81	442 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	ZNF813	Q6ZN06	617 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	DNM1P46	Q6ZS02	220 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	TMPRSS11F	Q6ZWK6	438 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452		Q71RC1	249 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	NANOGNB	Q7Z5D8	188 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	OR8J1	Q8NGP2	316 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	RHOXF1	Q8NHV9	184 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	FAM81A	Q8TBF8	368 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	LIPH	Q8WWY8	451 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	TMEM54	Q969K7	222 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	SGTB	Q96EQ0	304 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	SLC25A44	Q96H78	314 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	FOXB1	Q99853	325 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	SEC61A2	Q9H9S3	476 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	C20orf141	Q9NUB4	165 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	CLN6	Q9NWW5	311 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452	B3GNT2	Q9NY97	397 aa		11.16	□□□□□ -0.62
RNF31-206	ENST00000558452		H7C417	338 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	BCL10	O95999	233 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	HMGN1	P05114	100 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	CELA3B	P08861	270 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	TSPAN19	P0C672	248 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	SMIM18	P0DKX4	95 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	HOXB4	P17483	251 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	EEF1B2	P24534	225 aa	Known RBP	11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	CALCR	P30988	508 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	CAPZA2	P47755	286 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	IDH3G	P51553	393 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	RPL18	Q07020	188 aa	Known RBP	11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	RAB35	Q15286	201 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	SWI5	Q1ZZU3	235 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	ANKDD1A	Q495B1	522 aa		11.15	□□□□□ -0.62
RNF31-206	ENST00000558452	SLC25A30	Q5SVS4	291 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms