RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 SDR9C7Q8NEX9 313 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 OR52E2Q8NGJ4 325 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 SMAP2Q8WU79 429 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-228ENST00000557302 DNAJC9Q8WXX5 260 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 LRTOMTQ8WZ04 291 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 PIGTQ969N2 578 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 DHRS9Q9BPW9 319 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 CCNB1IP1Q9NPC3 277 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 POLE4Q9NR33 117 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 FAIMQ9NVQ4 179 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 REV1Q9UBZ9 1251 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 ITGB1BP2Q9UKP3 347 aa11.8□□□□□ -0.52
SHMT2-228ENST00000557302 COA3Q9Y2R0 106 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-228ENST00000557302 IGHV2OR16-5A0A0B4J2B6 119 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 E7EQL1 145 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 SERPINA5P05154 406 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 MMP7P09237 267 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-228ENST00000557302 OSMP13725 252 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 ZNF23P17027 643 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 POU1F1P28069 291 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 CALCRP30988 508 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 CENPAP49450 140 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 PCBD1P61457 104 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 PLP2Q04941 152 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 GABPB1Q06547 395 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-228ENST00000557302 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 OR4F15Q8NGB8 312 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 OR4Q3Q8NH05 313 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 TMEM171Q8WVE6 324 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 FBXO17Q96EF6 278 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 CENPNQ96H22 339 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-228ENST00000557302 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 FOXN4Q96NZ1 517 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 TSSK2Q96PF2 358 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 C1orf198Q9H425 327 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 EMC7Q9NPA0 242 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
SHMT2-228ENST00000557302 BEX4Q9NWD9 120 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-228ENST00000557302 KLHL21Q9UJP4 597 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 LAMP3Q9UQV4 416 aa11.79□□□□□ -0.52
SHMT2-228ENST00000557302 IGLV1-36A0A0B4J1U3 117 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 IQCMA0A1B0GVH7 501 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 OR6C68A6NDL8 312 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 RIIAD1A6NNX1 92 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 C12orf71A8MTZ7 269 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 G3V2T6 193 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 TMCC2O75069 709 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 PTHP01270 115 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 IFNGP01579 166 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 DANCRP0C864 163 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 ZNF32P17041 273 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 FABP6P51161 128 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 HSF2Q03933 536 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 DEFB113Q30KQ7 82 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 PGGHGQ32M88 737 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 PABPC1L2AQ5JQF8 200 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 ZNF544Q6NX49 715 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 SLC27A4Q6P1M0 643 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 FAHD1Q6P587 224 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 ZDHHC13Q8IUH4 622 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 OR6V1Q8N148 313 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 FBXL14Q8N1E6 418 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 SVOPLQ8N434 492 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 IQCF1Q8N6M8 205 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 NPEPL1Q8NDH3 523 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 SLC30A7Q8NEW0 376 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 ZNF416Q9BWM5 594 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 RACGAP1Q9H0H5 632 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 SEMA6AQ9H2E6 1030 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 FN3KQ9H479 309 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 SRA1Q9HD15 236 aaKnown RBP11.78□□□□□ -0.52
SHMT2-228ENST00000557302 PAPOLBQ9NRJ5 636 aaKnown RBP11.78□□□□□ -0.52
SHMT2-228ENST00000557302 B9D1Q9UPM9 204 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 TIMM10BQ9Y5J6 103 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 FKBP7Q9Y680 259 aa11.78□□□□□ -0.52
SHMT2-228ENST00000557302 HEATR1Q9H583 2144 aaKnown RBP11.78□□□□□ -0.52
SHMT2-228ENST00000557302 H3BNX3 289 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 DCTN6O00399 190 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 SMPD2O60906 423 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 SCG5P05408 212 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 SOD3P08294 240 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 ZNF3P17036 446 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 TTKP33981 857 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 GRK5P34947 590 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 DAPP51397 102 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 ART1P52961 327 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 GALK2Q01415 458 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 HGFACQ04756 655 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 GLO1Q04760 184 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 ENDOGQ14249 297 aaKnown RBP11.77□□□□□ -0.53
SHMT2-228ENST00000557302 AGAP6Q5VW22 663 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 UGT2A3Q6UWM9 527 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 SYT9Q86SS6 491 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 ZBTB46Q86UZ6 589 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 ZNF584Q8IVC4 421 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 MUC15Q8N387 334 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 CYB561A3Q8NBI2 242 aa11.77□□□□□ -0.53
SHMT2-228ENST00000557302 SLC37A3Q8NCC5 494 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms