RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SLC6A2P23975 617 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 MPV17P39210 176 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SLC6A9P48067 706 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SF3A3Q12874 501 aaKnown RBP eCLIP10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SCARB2Q14108 478 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 ZMAT1Q5H9K5 638 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SPATA46Q5T0L3 261 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 LEG1Q6P5S2 330 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 C16orf87Q6PH81 154 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 ARMC8Q8IUR7 673 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 FUNDC1Q8IVP5 155 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 ZNF101Q8IZC7 436 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 LRRC18Q8N456 261 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 HIPK4Q8NE63 616 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SLC25A40Q8TBP6 338 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 KLF14Q8TD94 323 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-221ENST00000556571 IPCEF1Q8WWN9 437 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-221ENST00000556571 POM121L2Q96KW2 1035 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 DCLRE1CQ96SD1 692 aaKnown RBP10.03□□□□□ -0.8
ACTN1-221ENST00000556571 MCHR1Q99705 422 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SLC19A3Q9BZV2 496 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 TMEM38AQ9H6F2 299 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 CCNB1IP1Q9NPC3 277 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 SLC25A37Q9NYZ2 338 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 EGFL7Q9UHF1 273 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 KLHL21Q9UJP4 597 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 ZNF229Q9UJW7 825 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 NDUFAF1Q9Y375 327 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 MMP24Q9Y5R2 645 aa10.03□□□□□ -0.8
ACTN1-221ENST00000556571 PRKDCP78527 4128 aaKnown RBP10.02□□□□□ -0.8
ACTN1-221ENST00000556571 A0A1B0GUS0 222 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 C5orf49A4QMS7 147 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 A8MXK9 166 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 H3BSA7 217 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 MDKP21741 143 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 WNT5AP41221 380 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 GDI2P50395 445 aaKnown RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 MRPS34P82930 218 aaKnown RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 TMEM155Q4W5P6 130 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 LRIF1Q5T3J3 769 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 TTC33Q6PID6 262 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 C9orf139Q6ZV77 190 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 HDDC2Q7Z4H3 204 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 LRRC28Q86X40 367 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 MSRB3Q8IXL7 192 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 C10orf111Q8N326 155 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 OR52E2Q8NGJ4 325 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 TSPEARQ8WU66 669 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 GEMIN6Q8WXD5 167 aaKnown RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 TMIGD2Q96BF3 282 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 ZNF347Q96SE7 839 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 SEPHS2Q99611 448 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.81
ACTN1-221ENST00000556571 OR2J1Q9GZK6 312 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 TMEM106BQ9NUM4 274 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 GMEB1Q9Y692 573 aa10.02□□□□□ -0.81
ACTN1-221ENST00000556571 LOC100509620A0A075B734 347 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 A0A1W2PRG6 482 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 MCIDASD6RGH6 385 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ASAH2BP0C7U1 165 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 PPIAL4GP0DN37 164 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 UMPSP11172 480 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ZNF32P17041 273 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 AQP1P29972 269 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 PCGF2P35227 344 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ZNF133P52736 654 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-221ENST00000556571 TNFAIP6P98066 277 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-221ENST00000556571 PAX8Q06710 450 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 NFYCQ13952 458 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 MAPRE2Q15555 327 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 TMEM255AQ5JRV8 349 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 PAGE3Q5JUK9 113 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ZNF362Q5T0B9 420 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-221ENST00000556571 C10orf128Q5T292 105 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 NANOGNBQ7Z5D8 188 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ZER1Q7Z7L7 766 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 NOXO1Q8NFA2 376 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ABHD4Q8TB40 342 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 TAF15Q92804 592 aaKnown RBP eCLIP10.01□□□□□ -0.81
ACTN1-221ENST00000556571 MPP4Q96JB8 637 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 MSL2Q9HCI7 577 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 DCAF16Q9NXF7 216 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 SLAMF8Q9P0V8 285 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 ARMCX1Q9P291 453 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 STX18Q9P2W9 335 aaKnown RBP10.01□□□□□ -0.81
ACTN1-221ENST00000556571 OR5V1Q9UGF6 321 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 IL20RAQ9UHF4 553 aa10.01□□□□□ -0.81
ACTN1-221ENST00000556571 CPSF4LA6NMK7 179 aaKnown RBP10□□□□□ -0.81
ACTN1-221ENST00000556571 BLOC1S5-TXNDC5H3BN57 136 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 M0R3H8 397 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 ICMTO60725 284 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 GPANK1O95872 356 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 KNG1P01042 644 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 ACADSP16219 412 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 GPX2P18283 190 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 TNFRSF1AP19438 455 aa10□□□□□ -0.81
ACTN1-221ENST00000556571 TNFSF4P23510 183 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms