RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SYT14P1Q58G82 188 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZMAT1Q5H9K5 638 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC35D3Q5M8T2 416 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 B3GNTL1Q67FW5 361 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 RGS7BPQ6MZT1 257 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 PIWIL3Q7Z3Z3 882 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 NRTNQ99748 197 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 BARHL1Q9BZE3 327 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 MMP28Q9H239 520 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 NRIP3Q9NQ35 241 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ANKRD12Q6UB98 2062 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 A0A1B0GTQ1 180 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PDGFBP01127 241 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 IFNA4P05014 189 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 IGFBP1P08833 259 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 SHC1P29353 583 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 MRPL19P49406 292 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 INSM1Q01101 510 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZNF92Q03936 586 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 NFATC3Q12968 1075 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC14A1Q13336 389 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ILKQ13418 452 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 RHEBQ15382 184 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ENTHD1Q8IYW4 607 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC22A24Q8N4F4 322 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 LINC01555Q8NAE3 123 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR4M1Q8NGD0 313 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR10K1Q8NGX5 313 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR10X1Q8NGY0 326 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 BANF2Q9H503 90 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CGGBP1Q9UFW8 167 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 IGHV5-10-1A0A0J9YXX1 117 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CXorf51AA0A1B0GTR3 108 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 F5H5P2 479 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PRICKLE3O43900 615 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 HOXC4P09017 264 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 GPX2P18283 190 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PCSK6P29122 969 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SDHAP31040 664 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 IL13RA1P78552 427 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 GLIPR1L1Q6UWM5 242 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 DLEU7Q6UYE1 221 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TMPRSS7Q7RTY8 843 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC43A2Q8N370 569 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CPNE4Q96A23 557 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 CNRIP1Q96F85 164 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 FAM53CQ9NYF3 392 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ITGB1BP2Q9UKP3 347 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ARFGEF1Q9Y6D6 1849 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ATXN7O15265 892 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 MRPS14O60783 128 aaKnown RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 S100A2P29034 98 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 KIR2DL1P43626 348 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 RRAS2P62070 204 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 EGFL6Q8IUX8 553 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZNF683Q8IZ20 524 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 RNF128Q8TEB7 428 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ALKBH3Q96Q83 286 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZNF649Q9BS31 505 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TNFRSF12AQ9NP84 129 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 SDHAF2Q9NX18 166 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TAS2R3Q9NYW6 316 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 FAM96BQ9Y3D0 163 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 GABRA5P31644 462 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TAS2R19P59542 299 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 Q499Y3 187 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 OR2A2Q6IF42 318 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 OVCH1Q7RTY7 1134 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 BPIFB2Q8N4F0 458 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 DNAJC22Q8N4W6 341 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 LGALS14Q8TCE9 139 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 APOBEC4Q8WW27 367 aaKnown RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 LIN7BQ9HAP6 207 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TAS2R4Q9NYW5 299 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 MAB21L2Q9Y586 359 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 A0A0G2JMP0 313 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 A0A0U1RQK1 487 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 DLL1O00548 723 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 KLK8O60259 260 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 SC5DO75845 299 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 POU3F3P20264 500 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 HNF4GQ14541 408 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ADPRMQ3LIE5 342 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 HEPHL1Q6MZM0 1159 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 SPAG16Q8N0X2 631 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 OR4M2Q8NGB6 313 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 AKR7LQ8NHP1 331 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 DPCDQ9BVM2 203 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 RGCCQ9H4X1 137 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ERVMER34-1Q9H9K5 563 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ACOXLQ9NUZ1 547 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 HIF1ANQ9NWT6 349 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 MBD1Q9UIS9 605 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 H3BMQ9 156 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 HOXD12P35452 270 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 CD79BP40259 229 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 C3AR1Q16581 482 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZNF718Q3SXZ3 478 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 GLYATL3Q5SZD4 288 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 APOOLQ6UXV4 268 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms