RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 HSF2Q03933 536 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 PSG7Q13046 419 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 PABPC1L2AQ5JQF8 200 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 Q6ZR03 302 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 Q6ZSV7 163 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 RFPL4BQ6ZWI9 263 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 COMTD1Q86VU5 262 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 KLBQ86Z14 1044 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 FITM2Q8N6M3 262 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 HIPK4Q8NE63 616 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 TBC1D15Q8TC07 691 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 EPS8L3Q8TE67 593 aaKnown RBP6.5□□□□□ -1.37
NXF1-215ENST00000533440 C10orf82Q8WW14 230 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 MCHR2Q969V1 340 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 OR52E6Q96RD3 313 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 NUDT16L1Q9BRJ7 211 aaKnown RBP6.5□□□□□ -1.37
NXF1-215ENST00000533440 TMEM43Q9BTV4 400 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 TPT1P8Q9HAU6 139 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 CACYBPQ9HB71 228 aaKnown RBP6.5□□□□□ -1.37
NXF1-215ENST00000533440 TMEM165Q9HC07 324 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 THUMPD1Q9NXG2 353 aaKnown RBP6.5□□□□□ -1.37
NXF1-215ENST00000533440 TAS2R5Q9NYW4 299 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 EIF3KQ9UBQ5 218 aaKnown RBP6.5□□□□□ -1.37
NXF1-215ENST00000533440 MIOXQ9UGB7 285 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 IL19Q9UHD0 177 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 PPP1R3CQ9UQK1 317 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 RYR2Q92736 4967 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 NOTCH3Q9UM47 2321 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 C5orf49A4QMS7 147 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 TMEM247A6NEH6 219 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 SMIM23A6NLE4 172 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 ITM2AO43736 263 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 TIMM8AO60220 97 aaPredicted RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 TPST2O60704 377 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 FSTL3O95633 263 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 BPGMP07738 259 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 ALDOCP09972 364 aaKnown RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 ZCCHC18P0CG32 403 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 RPS2P15880 293 aaKnown RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 ZNF32P17041 273 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 TNFSF4P23510 183 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 GDI2P50395 445 aaKnown RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 ZNF84P51523 738 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 NME5P56597 212 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 FGF12P61328 243 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 PPP1CBP62140 327 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 GNB2P62879 340 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 MELKQ14680 651 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 OR1Q1Q15612 314 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 C10orf128Q5T292 105 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 RUSC1-AS1Q66K80 236 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 OGFOD2Q6N063 350 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 SLC27A4Q6P1M0 643 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 DHRS4L2Q6PKH6 230 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 LINC00114Q6XXX2 140 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 ZER1Q7Z7L7 766 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 LDLRAD3Q86YD5 345 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 IFT20Q8IY31 132 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 C17orf53Q8N3J3 647 aaPredicted RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 LRRC18Q8N456 261 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 ZNF781Q8N8C0 355 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 BBS10Q8TAM1 723 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 TCP10LQ8TDR4 215 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 ITLN1Q8WWA0 313 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 NABP1Q96AH0 204 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 VPS33AQ96AX1 596 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 NEIL1Q96FI4 390 aaPredicted RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 PLEKHA8Q96JA3 519 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 ZNF347Q96SE7 839 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 SEPHS2Q99611 448 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 MRPL13Q9BYD1 178 aaKnown RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 SIAEQ9HAT2 523 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 GCM1Q9NP62 436 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 AIG1Q9NVV5 245 aa6.49□□□□□ -1.37
NXF1-215ENST00000533440 TET2Q6N021 2002 aaPredicted RBP6.49□□□□□ -1.37
NXF1-215ENST00000533440 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 CENPBD1B2RD01 187 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 IFNL4K9M1U5 179 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 P2RY10O00398 339 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 RNF13O43567 381 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 PIP5K1CO60331 668 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 TSPAN9O75954 239 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 OR6A2O95222 327 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 IGHV4-59P01825 116 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 IGHG1P01857 330 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 BMP2P12643 396 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 MMP9P14780 707 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 ETS2P15036 469 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 KITLGP21583 273 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 FUT4P22083 530 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 ETV4P43268 484 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 IER3P46695 156 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 CDH12P55289 794 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 MRPS34P82930 218 aaKnown RBP6.48□□□□□ -1.37
NXF1-215ENST00000533440 PSG4Q00888 419 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 ZNF74Q16587 644 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 GTDC1Q4AE62 458 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 TTMPQ5BVD1 217 aa6.48□□□□□ -1.37
NXF1-215ENST00000533440 GDPGP1Q6ZNW5 385 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms