RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 ZNF347Q96SE7 839 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 SIKE1Q9BRV8 207 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 SLC19A3Q9BZV2 496 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 MS4A7Q9GZW8 240 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-216ENST00000529928 CCNB1IP1Q9NPC3 277 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 ZNF229Q9UJW7 825 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 INSIG2Q9Y5U4 225 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 TANC2Q9HCD6 1990 aa13.57□□□□□ -0.24
COL16A1-216ENST00000529928 C5orf49A4QMS7 147 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 H3BSA7 217 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 CD55P08174 381 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 SBK2P0C263 348 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 GPX2P18283 190 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 AQP1P29972 269 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 WNT5AP41221 380 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 MTNR1AP48039 350 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 SLC9A3R2Q15599 337 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 TMEM155Q4W5P6 130 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 TMEM255AQ5JRV8 349 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 LEG1Q6P5S2 330 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 HDDC2Q7Z4H3 204 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 DPP10Q8N608 796 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 SLC25A40Q8TBP6 338 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
COL16A1-216ENST00000529928 POM121L2Q96KW2 1035 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 MRPL13Q9BYD1 178 aaKnown RBP13.56□□□□□ -0.24
COL16A1-216ENST00000529928 OR2J1Q9GZK6 312 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 RABEP2Q9H5N1 569 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 SIAEQ9HAT2 523 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
COL16A1-216ENST00000529928 CORO2BQ9UQ03 480 aa13.56□□□□□ -0.24
COL16A1-216ENST00000529928 A0A0G2JND7 137 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 A8MXK9 166 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 MCIDASD6RGH6 385 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 M0R3H8 397 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 ASAH2BP0C7U1 165 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 UMPSP11172 480 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 MDKP21741 143 aaPredicted RBP13.55□□□□□ -0.24
COL16A1-216ENST00000529928 SLC6A9P48067 706 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 GDI2P50395 445 aaKnown RBP13.55□□□□□ -0.24
COL16A1-216ENST00000529928 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
COL16A1-216ENST00000529928 TNFAIP6P98066 277 aaPredicted RBP13.55□□□□□ -0.24
COL16A1-216ENST00000529928 ENTPD8Q5MY95 495 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 C10orf128Q5T292 105 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 METTL21CQ5VZV1 264 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 SMYD1Q8NB12 490 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 DCLRE1CQ96SD1 692 aaKnown RBP13.55□□□□□ -0.24
COL16A1-216ENST00000529928 SEPHS2Q99611 448 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 CPPED1Q9BRF8 314 aaPredicted RBP13.55□□□□□ -0.24
COL16A1-216ENST00000529928 TMEM106BQ9NUM4 274 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 EGFL7Q9UHF1 273 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 KLHL21Q9UJP4 597 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 ANGPT4Q9Y264 503 aa13.55□□□□□ -0.24
COL16A1-216ENST00000529928 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 A0A1W2PRG6 482 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 CPSF4LA6NMK7 179 aaKnown RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 EVPLLA8MZ36 301 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 BLOC1S5-TXNDC5H3BN57 136 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 KPNA4O00629 521 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ZNF32P17041 273 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 DAP3P51398 398 aaKnown RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 SEC61A1P61619 476 aaKnown RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 PPP1CBP62140 327 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ESCO2Q56NI9 601 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 RUNDC3AQ59EK9 446 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ZER1Q7Z7L7 766 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ABHD4Q8TB40 342 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ADAMTS16Q8TE57 1224 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 TSPEARQ8WU66 669 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 TMIGD2Q96BF3 282 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 MPP4Q96JB8 637 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 ARHGDIGQ99819 225 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 SMURF2Q9HAU4 748 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 MSL2Q9HCI7 577 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 FGFR1OP2Q9NVK5 253 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 STX18Q9P2W9 335 aaKnown RBP13.54□□□□□ -0.24
COL16A1-216ENST00000529928 OR5V1Q9UGF6 321 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 MMP24Q9Y5R2 645 aa13.54□□□□□ -0.24
COL16A1-216ENST00000529928 A0A1B0GUS0 222 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 ICMTO60725 284 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 PPIAL4GP0DN37 164 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 ACADSP16219 412 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 TNFRSF1AP19438 455 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 BTG1P62324 171 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 SELPLGQ14242 412 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 DUSP7Q16829 419 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 SPRNQ5BIV9 151 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 MTX3Q5HYI7 312 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 C16orf87Q6PH81 154 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 RFPL4BQ6ZWI9 263 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 SPATC1Q76KD6 591 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 LRRC28Q86X40 367 aaPredicted RBP13.53□□□□□ -0.24
COL16A1-216ENST00000529928 PARP8Q8N3A8 854 aa13.53□□□□□ -0.24
COL16A1-216ENST00000529928 OR52E2Q8NGJ4 325 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms