RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 AGR3Q8TD06 166 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 SLC38A5Q8WUX1 472 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 C10orf82Q8WW14 230 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 OR8B2Q96RD0 313 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 PANX1Q96RD7 426 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 SIAEQ9HAT2 523 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 ELOVL3Q9HB03 270 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 FBLN5Q9UBX5 448 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 LOC100509620A0A075B734 347 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 A0A1B0GWA3 101 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 PHYHO14832 338 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 ENSAO43768 121 aaKnown RBP9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 TIMM8AO60220 97 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 ALDH3A1P30838 453 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 GDI2P50395 445 aaKnown RBP9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF84P51523 738 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 HOXC5Q00444 222 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 EGR3Q06889 387 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 CKAP4Q07065 602 aaKnown RBP9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 PSG7Q13046 419 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 SPANXN4Q5MJ08 99 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 CD276Q5ZPR3 534 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 DHRS7BQ6IAN0 325 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 ARL9Q6T311 187 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 VASH1Q7L8A9 365 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 OR2Z1Q8NG97 314 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 OR5J2Q8NH18 312 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 CFHR4Q92496 578 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 PCGF1Q9BSM1 259 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 AKTIPQ9H8T0 292 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 GCM1Q9NP62 436 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 CLN8Q9UBY8 286 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
AMBRA1-207ENST00000529553 DNAH9Q9NYC9 4486 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 IGHV1-69DA0A0B4J2H0 117 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 TMEM247A6NEH6 219 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 CENPBD1B2RD01 187 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF879B4DU55 563 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 E9PBE3 544 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 OR6A2O95222 327 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 PGA4P0DJD7 388 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 PGA3P0DJD8 388 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 ADORA3P0DMS8 318 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 THRBP10828 461 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 KRT4P19013 534 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 CFHR2P36980 270 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 PITPNBP48739 271 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 MVDP53602 400 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 HNRNPA0Q13151 305 aaKnown RBP9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 C11orf87Q6NUJ2 197 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 LRRC18Q8N456 261 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 ABHD4Q8TB40 342 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 MOGAT1Q96PD6 335 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF607Q96SK3 696 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 OCSTAMPQ9BR26 566 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 TMEM246Q9BRR3 403 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 TMEM43Q9BTV4 400 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 BCL2L10Q9HD36 194 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 CCNB1IP1Q9NPC3 277 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 SELENONQ9NZV5 590 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 USH1CQ9Y6N9 552 aa9.65□□□□□ -0.86
AMBRA1-207ENST00000529553 PLXNB1O43157 2135 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 DOCK11Q5JSL3 2073 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 RNASEK-C17orf49H0YIS7 233 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 SERPINI2O75830 405 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 TOX4O94842 621 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 IGHG1P01857 330 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 BCHEP06276 602 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 SFTPBP07988 381 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 MMP9P14780 707 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 GSTM3P21266 225 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 KITLGP21583 273 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 HTR2AP28223 471 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 EPHA3P29320 983 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 CDKN2CP42773 168 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 NPY4RP50391 375 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 MMP16P51512 607 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 ZNF133P52736 654 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 MRPS34P82930 218 aaKnown RBP9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 COL10A1Q03692 680 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 EMX1Q04741 257 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 ZNF181Q2M3W8 571 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 ZNF404Q494X3 552 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 WDR25Q64LD2 544 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 ZNF841Q6ZN19 808 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 Q6ZR03 302 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 ALDH16A1Q8IZ83 802 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 C10orf53Q8N6V4 93 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 SPERTQ8NA61 448 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 OR4S1Q8NGB4 309 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 ITLN1Q8WWA0 313 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 MCHR2Q969V1 340 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 PHF21AQ96BD5 680 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 TMEM19Q96HH6 336 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 C4orf45Q96LM5 186 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 OR2V2Q96R30 315 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 TBX15Q96SF7 602 aa9.64□□□□□ -0.87
AMBRA1-207ENST00000529553 PPCSQ9HAB8 311 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms