RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DHRS9Q9BPW9 319 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 BDH2Q9BUT1 245 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 ZNF556Q9HAH1 456 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 POLE4Q9NR33 117 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 B9D1Q9UPM9 204 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
USP46-209ENST00000514536 IGHV2OR16-5A0A0B4J2B6 119 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 OR6C68A6NDL8 312 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 H3BN98 237 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 DCTN6O00399 190 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 MPZL1O95297 269 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 CST2P09228 141 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 MSR1P21757 451 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 POU1F1P28069 291 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 HGFACQ04756 655 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 OTPQ5XKR4 325 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 UGT2A3Q6UWM9 527 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ZNF584Q8IVC4 421 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 OR6V1Q8N148 313 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 LNX2Q8N448 690 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 NPEPL1Q8NDH3 523 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 RAB3IPQ96QF0 476 aaPredicted RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 SNX18Q96RF0 628 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ZNF416Q9BWM5 594 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 FN3KQ9H479 309 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 RPRD1BQ9NQG5 326 aaKnown RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 FBXL3Q9UKT7 428 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 FAM171A2A8MVW0 826 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 CD8AP01732 235 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 FCGR1AP12314 374 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ZNF35P13682 527 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ZNF32P17041 273 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 CRABP1P29762 137 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 TTKP33981 857 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 HSF2Q03933 536 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 PLP2Q04941 152 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 ENDOGQ14249 297 aaKnown RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 DNM1P34Q6PK57 102 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 YTHDF3Q7Z739 585 aaKnown RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 GLB1L2Q8IW92 636 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 IQCF1Q8N6M8 205 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 CYB561A3Q8NBI2 242 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 OR2T33Q8NG76 320 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 OR4F15Q8NGB8 312 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 IGFBPL1Q8WX77 278 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 DDOQ99489 341 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 SEMA6AQ9H2E6 1030 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 FAIMQ9NVQ4 179 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 BEX4Q9NWD9 120 aaPredicted RBP12.09□□□□□ -0.47
USP46-209ENST00000514536 BAIAP2Q9UQB8 552 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 TIMM10BQ9Y5J6 103 aa12.09□□□□□ -0.47
USP46-209ENST00000514536 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 G3V2T6 193 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 SMPD2O60906 423 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 GPANK1O95872 356 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 CCL2P13500 99 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 OSMP13725 252 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 ZNF23P17027 643 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 APOBEC3AP31941 199 aaPredicted RBP12.08□□□□□ -0.48
USP46-209ENST00000514536 DAPP51397 102 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 PCBD1P61457 104 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 PSG4Q00888 419 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 AGAP6Q5VW22 663 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 ZNF544Q6NX49 715 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 VHLLQ6RSH7 139 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 FBXL14Q8N1E6 418 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 SLC37A3Q8NCC5 494 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 SLC30A7Q8NEW0 376 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 AKR7LQ8NHP1 331 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 C11orf40Q8WZ69 217 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 FOXC2Q99958 501 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
USP46-209ENST00000514536 HEATR1Q9H583 2144 aaKnown RBP12.07□□□□□ -0.48
USP46-209ENST00000514536 IGLV1-36A0A0B4J1U3 117 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 PTHP01270 115 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
USP46-209ENST00000514536 DAG1Q14118 895 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 GINS1Q14691 196 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 TESK1Q15569 626 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 ACSM5Q6NUN0 579 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.07□□□□□ -0.48
USP46-209ENST00000514536 DTX2Q86UW9 622 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 ZBTB46Q86UZ6 589 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 MUC15Q8N387 334 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 CENPNQ96H22 339 aaPredicted RBP12.07□□□□□ -0.48
USP46-209ENST00000514536 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
USP46-209ENST00000514536 OR2H1Q9GZK4 316 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 WNT5BQ9H1J7 359 aa12.07□□□□□ -0.48
USP46-209ENST00000514536 CXorf56Q9H5V9 222 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms