RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 MCHR2Q969V1 340 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 SEPHS2Q99611 448 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 NUF2Q9BZD4 464 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 TAS2R5Q9NYW4 299 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 H0YL77 283 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 TMEM178BH3BS89 294 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 RNF13O43567 381 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
DDX41-216ENST00000513562 GPR137BO60478 399 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 IGHG1P01857 330 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 CSF1P09603 554 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 THRBP10828 461 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 BMP2P12643 396 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
DDX41-216ENST00000513562 ZNF32P17041 273 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 TNFSF4P23510 183 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 ETV4P43268 484 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 GDI2P50395 445 aaKnown RBP9.13□□□□□ -0.95
DDX41-216ENST00000513562 RPL14P50914 215 aaKnown RBP9.13□□□□□ -0.95
DDX41-216ENST00000513562 MMP16P51512 607 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 ZNF84P51523 738 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 ZNF133P52736 654 aaPredicted RBP9.13□□□□□ -0.95
DDX41-216ENST00000513562 NCALDP61601 193 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 GNB2P62879 340 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 PSG7Q13046 419 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 OR1Q1Q15612 314 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 ZER1Q7Z7L7 766 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 KLBQ86Z14 1044 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 FITM2Q8N6M3 262 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 ZNF347Q96SE7 839 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 ZBTB18Q99592 522 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 MRPL13Q9BYD1 178 aaKnown RBP9.13□□□□□ -0.95
DDX41-216ENST00000513562 C20orf27Q9GZN8 174 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 MEAF6Q9HAF1 191 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 SIAEQ9HAT2 523 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 TMEM27Q9HBJ8 222 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 CCNB1IP1Q9NPC3 277 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 IL19Q9UHD0 177 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 PPP1R3CQ9UQK1 317 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 RAP2CQ9Y3L5 183 aa9.13□□□□□ -0.95
DDX41-216ENST00000513562 TANC2Q9HCD6 1990 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 TNFRSF13BO14836 293 aaPredicted RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 TPST1O60507 370 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 TPST2O60704 377 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 ANP32DO95626 131 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 OPN1MWP04001 364 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 SERPINE1P05121 402 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 IL6P05231 212 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 OPN1MW2P0DN77 364 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 OPN1MW3P0DN78 364 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 CDH12P55289 794 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 CLRN1P58418 232 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 ABCE1P61221 599 aaKnown RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 FGF12P61328 243 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 MRPS34P82930 218 aaKnown RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 PSG4Q00888 419 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 RGNQ15493 299 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 FAM189A2Q15884 450 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 ZNF74Q16587 644 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 CEP85LQ5SZL2 805 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 C10orf128Q5T292 105 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 Q6ZR03 302 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 NUDCD3Q8IVD9 361 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 ZSCAN4Q8NAM6 433 aaPredicted RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 NOXO1Q8NFA2 376 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 OR2Z1Q8NG97 314 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 AKR7LQ8NHP1 331 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 VANGL1Q8TAA9 524 aaPredicted RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 TBC1D15Q8TC07 691 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 C10orf82Q8WW14 230 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 ITLN1Q8WWA0 313 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 NABP1Q96AH0 204 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 PLEKHA8Q96JA3 519 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 C16orf45Q96MC5 204 aaPredicted RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 SORT1Q99523 831 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 NUDT16L1Q9BRJ7 211 aaKnown RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 KCNN2Q9H2S1 579 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 TMEM165Q9HC07 324 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 SLCO1B3Q9NPD5 702 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 MIOXQ9UGB7 285 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 HAO1Q9UJM8 370 aa9.12□□□□□ -0.95
DDX41-216ENST00000513562 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
DDX41-216ENST00000513562 TLDC2A0PJX2 215 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 CENPBD1B2RD01 187 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 C5orf58C9J3I9 102 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 IFNL4K9M1U5 179 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 SURF4O15260 269 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 IGHV4-59P01825 116 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 ARHGDIAP52565 204 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 RGS8P57771 180 aaPredicted RBP9.11□□□□□ -0.95
DDX41-216ENST00000513562 FADDQ13158 208 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 VAX1Q5SQQ9 334 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 SLC27A4Q6P1M0 643 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 Q6ZSV7 163 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 KIRREL3Q8IZU9 778 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 PKNOX2Q96KN3 472 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms