RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 DECR2Q9NUI1 292 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 IQCMA0A1B0GVH7 501 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 C5orf49A4QMS7 147 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 J3QLI3 93 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 IGHV2-70P01814 119 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 ADH4P08319 380 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 APLNRP35414 380 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 SELENOVP59797 346 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 PIN1Q13526 163 aaPredicted RBP13.43□□□□□ -0.26
RAB40C-202ENST00000509637 ENDOGQ14249 297 aaKnown RBP13.43□□□□□ -0.26
RAB40C-202ENST00000509637 SGCAQ16586 387 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 HFEQ30201 348 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 MMEL1Q495T6 779 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 MBNL2Q5VZF2 373 aaKnown RBP13.43□□□□□ -0.26
RAB40C-202ENST00000509637 OTPQ5XKR4 325 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 CCDC80Q76M96 950 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 DPPA2Q7Z7J5 298 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 CALHM3Q86XJ0 350 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 OR1J2Q8NGS2 313 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 ZNF747Q9BV97 191 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 SUCNR1Q9BXA5 334 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 OR2H1Q9GZK4 316 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 C1orf198Q9H425 327 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 INIPQ9NRY2 104 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 CORO2BQ9UQ03 480 aa13.43□□□□□ -0.26
RAB40C-202ENST00000509637 TPD52L2O43399 206 aaKnown RBP13.42□□□□□ -0.26
RAB40C-202ENST00000509637 HIST1H2ABP04908 130 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 HKR1P10072 659 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 LAP3P28838 519 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 OR1E2P47887 323 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 ERFP50548 548 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 ZNF84P51523 738 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 PPP1CBP62140 327 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 TEKQ02763 1124 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 HSF2Q03933 536 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 PLP2Q04941 152 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 PSG7Q13046 419 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 VMACQ2NL98 169 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 ZNF718Q3SXZ3 478 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 TTMPQ5BVD1 217 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 RABL3Q5HYI8 236 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 FAM209AQ5JX71 171 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 PRR31Q5SQ13 230 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 FAM27BQ5VT28 67 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 ZNF774Q6NX45 483 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 FOXL2NBQ6ZUU3 175 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 HIST3H2AQ7L7L0 130 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 JAZF1Q86VZ6 243 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 RAB1CQ92928 201 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 HIST1H2ACQ93077 130 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 SGTBQ96EQ0 304 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 ELMOD3Q96FG2 381 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 DCLRE1CQ96SD1 692 aaKnown RBP13.42□□□□□ -0.26
RAB40C-202ENST00000509637 GAL3ST1Q99999 423 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 UBAP1Q9NZ09 502 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 GMPR2Q9P2T1 348 aaKnown RBP13.42□□□□□ -0.26
RAB40C-202ENST00000509637 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 GPR160Q9UJ42 338 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 RIMS3Q9UJD0 308 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 NDUFAF1Q9Y375 327 aa13.42□□□□□ -0.26
RAB40C-202ENST00000509637 A0A1W2PRG6 482 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 FXYD1O00168 92 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 PTHP01270 115 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 CD55P08174 381 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 SBK2P0C263 348 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 DRD4P21917 467 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 LIMS1P48059 325 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 NANOGP8Q6NSW7 305 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 PATL1Q86TB9 770 aaKnown RBP13.41□□□□□ -0.26
RAB40C-202ENST00000509637 IGFN1Q86VF2 1251 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 ABHD4Q8TB40 342 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 ZMYND19Q96E35 227 aaPredicted RBP13.41□□□□□ -0.26
RAB40C-202ENST00000509637 SH3GLB1Q9Y371 365 aa13.41□□□□□ -0.26
RAB40C-202ENST00000509637 DNAJC9-AS1A6NH13 148 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 ICMTO60725 284 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 ZNF26P17031 533 aaPredicted RBP13.4□□□□□ -0.26
RAB40C-202ENST00000509637 PAX2Q02962 417 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 CDK5R2Q13319 367 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 NFYCQ13952 458 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 DOK3Q7L591 496 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 BPIFB2Q8N4F0 458 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 LRRC8CQ8TDW0 803 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 TMEM239Q8WW34 195 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 LRMDAQ9H2I8 198 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 TXNIPQ9H3M7 391 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 POLR3KQ9Y2Y1 108 aaPredicted RBP13.4□□□□□ -0.26
RAB40C-202ENST00000509637 NPTNQ9Y639 398 aa13.4□□□□□ -0.26
RAB40C-202ENST00000509637 CMYA5Q8N3K9 4069 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 PPIAL4EA0A075B759 164 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 PPIAL4CA0A0B4J2A2 164 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 ISPDA4D126 451 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 MCIDASD6RGH6 385 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 F5H0A9 414 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-202ENST00000509637 PPIAL4DF5H284 164 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 IMPA2O14732 288 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms