RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TMED5Q9Y3A6 229 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 POLR3HQ9Y535 204 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 KPTNQ9Y664 436 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 DSCAML1Q8TD84 2053 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM72A0PK05 275 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MEIOCA2RUB1 952 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 A6NDX4 124 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 VGLL3A8MV65 326 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SEC14L6B5MCN3 397 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 FBP2O00757 339 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 AZIN1O14977 448 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PDPK1O15530 556 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF264O43296 627 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 EIF4E2O60573 245 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 FZD7O75084 574 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SPAG7O75391 227 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SLC22A3O75751 556 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 BRI3O95415 125 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SERPINE1P05121 402 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 KRT16P08779 473 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ANXA4P09525 319 aaPredicted RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 B4GALT1P15291 398 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 HPGDP15428 266 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 DDCP20711 480 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 IMPDH1P20839 514 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 TACR3P29371 465 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MPIP34949 423 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SOAT1P35610 550 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 APOBEC1P41238 236 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 CRATP43155 626 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 VDAC2P45880 294 aaPredicted RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SERPINB4P48594 390 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 NPY4RP50391 375 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 HTR6P50406 440 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 NCBP2P52298 156 aaKnown RBP eCLIP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 AQP5P55064 265 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 STX1BP61266 288 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 HPCAP84074 193 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 EWSR1Q01844 656 aaKnown RBP eCLIP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 BTKQ06187 659 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 FHL3Q13643 280 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MFSD13AQ14CX5 517 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PCLAFQ15004 111 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 CHI3L2Q15782 390 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MOGQ16653 247 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF181Q2M3W8 571 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SPDYE7PQ495Y7 208 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 GALNTL6Q49A17 601 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 VPS26BQ4G0F5 336 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 UNC50Q53HI1 259 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 RUNDC3AQ59EK9 446 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SPATA46Q5T0L3 261 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 THEM4Q5T1C6 240 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 KANK2Q63ZY3 851 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 LRIG3Q6UXM1 1119 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 RFPL4BQ6ZWI9 263 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 RPS27LQ71UM5 84 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 NLRC3Q7RTR2 1065 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 OR2W3Q7Z3T1 314 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 GPAT4Q86UL3 456 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM219Q86XT9 240 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 C10orf107Q8IVU9 208 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SKA3Q8IX90 412 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 DYNAPQ8N1N2 210 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ANKRD42Q8N9B4 389 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 DTX3Q8N9I9 347 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PNLDC1Q8NA58 520 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 FNDC5Q8NAU1 212 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 LY6G5BQ8NDX9 201 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 C19orf18Q8NEA5 215 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SLC30A7Q8NEW0 376 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 OR51D1Q8NGF3 324 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 RFWD2Q8NHY2 731 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 VANGL1Q8TAA9 524 aaPredicted RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 FAM76AQ8TAV0 307 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 SLC25A40Q8TBP6 338 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 KLF14Q8TD94 323 aaPredicted RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MGARPQ8TDB4 240 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 TCP10LQ8TDR4 215 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MZB1Q8WU39 189 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PPCDCQ96CD2 204 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 CHMP6Q96FZ7 201 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 METTL2AQ96IZ6 378 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PPP3R2Q96LZ3 170 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 AMDHD1Q96NU7 426 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 MS4A4EQ96PG1 132 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 OR2M2Q96R28 347 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 OR2V2Q96R30 315 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 KCNA7Q96RP8 456 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ZBTB18Q99592 522 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PAIP2Q9BPZ3 127 aaKnown RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF649Q9BS31 505 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 NAA11Q9BSU3 229 aaPredicted RBP2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PARD6BQ9BYG5 372 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 ACPTQ9BZG2 426 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 BCL2L14Q9BZR8 327 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 PRSS22Q9GZN4 317 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 POFUT1Q9H488 388 aa2.63□□□□□ -1.99
TCOF1-208ENST00000506063 GSTO2Q9H4Y5 243 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms