RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TCRBV16S1A1N1A0A5B0 115 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 OR2AT4A6NND4 320 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 EEF1E1-BLOC1S5C9J1V9 151 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF587BE7ETH6 402 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 ROS1P08922 2347 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 LIMS3P0CW19 117 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 LIMS4P0CW20 117 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 PRSS42Q7Z5A4 293 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 OR4M2Q8NGB6 313 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 OR5H2Q8NGV7 314 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 OR51E1Q8TCB6 317 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 UCK1Q9HA47 277 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 MEIOCA2RUB1 952 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 VAMP5O95183 116 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 CDKN2AP42771 156 aaKnown RBP12.74□□□□□ -0.37
TCOF1-207ENST00000504761 MAGEB1P43366 347 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 TPBGQ13641 420 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 TMEM53Q6P2H8 277 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 KANSL1Q7Z3B3 1105 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 CCDC54Q8NEL0 328 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 ZPBPQ9BS86 351 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 SARGQ9BW04 601 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 LOC107986453A0A1B0GWG9 222 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 OR7C1O76099 320 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-207ENST00000504761 LAP3P28838 519 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 AVPR2P30518 371 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 FUT5Q11128 374 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 SWI5Q1ZZU3 235 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 UNQ6126/PRO20091Q6UXV3 157 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 APOOLQ6UXV4 268 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 OR2Y1Q8NGV0 311 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 SIGLEC11Q96RL6 698 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 FBXO9Q9UK97 447 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-207ENST00000504761 FAPQ12884 760 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 CDK5R1Q15078 307 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 NAXDQ8IW45 347 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 CREB3L1Q96BA8 519 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
TCOF1-207ENST00000504761 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 ANKRD30BLA7E2S9 258 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 HOXD12P35452 270 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 TMEM81Q6P7N7 255 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 CFAP77Q6ZQR2 320 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 PLPP5Q8NEB5 264 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 SORCS2Q96PQ0 1159 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 TMEM43Q9BTV4 400 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 ABHD6Q9BV23 337 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 SLC5A7Q9GZV3 580 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
TCOF1-207ENST00000504761 POLEQ07864 2286 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 A0A1W2PQM1 296 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 SGCEO43556 437 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 EDN3P14138 238 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 FOXC1Q12948 553 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 FZD5Q13467 585 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 TATDN3Q17R31 274 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 CCDC71Q8IV32 467 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF679Q8IYX0 411 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ZADH2Q8N4Q0 377 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 CELF2-AS1Q8N7Q2 184 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 OR2T35Q8NGX2 323 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 MFSD8Q8NHS3 518 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 OXGR1Q96P68 337 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ACTR6Q9GZN1 396 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 COPZ2Q9P299 210 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 HSPB6O14558 160 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 KLK10O43240 276 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 GCH1P30793 250 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 GNRHRP30968 328 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF93P35789 620 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-207ENST00000504761 GDNFP39905 211 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF136P52737 540 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 OR1C1Q15619 314 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 OR6V1Q8N148 313 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 SAP25Q8TEE9 199 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 CT55Q8WUE5 264 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 NINJ1Q92982 152 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 FAM3DQ96BQ1 224 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 TMEM246Q9BRR3 403 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 TAS2R4Q9NYW5 299 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 TCFL5Q9UL49 500 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 KLF13Q9Y2Y9 288 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-207ENST00000504761 B4GALT1P15291 398 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF44P15621 663 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 MSR1P21757 451 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 SPINK14Q6IE38 97 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 OGFOD3Q6PK18 319 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 FAM71CQ8NEG0 241 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 SMIM19Q96E16 107 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF224Q9NZL3 707 aa12.72□□□□□ -0.37
TCOF1-207ENST00000504761 PILRBQ9UKJ0 227 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms