RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TMEM27Q9HBJ8 222 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 HRASLSQ9HDD0 168 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SPANXA1Q9NS26 97 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RCC2Q9P258 522 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 POLR3KQ9Y2Y1 108 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM96BQ9Y3D0 163 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OARD1Q9Y530 152 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SLCO1B1Q9Y6L6 691 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 KNL1Q8NG31 2342 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ANKRD20A5PA0PJZ0 165 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR5H14A6NHG9 310 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RIIAD1A6NNX1 92 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 WDR1O75083 606 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CSN2P05814 226 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CRHP06850 196 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CTSLP07711 333 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CGB3P0DN86 165 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CGB7P0DN87 165 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CXCL8P10145 99 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TXNP10599 105 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 POU3F2P20265 443 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 EPHA1P21709 976 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 DTYMKP23919 212 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TIA1P31483 386 aaKnown RBP eCLIP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 AKT2P31751 481 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FLT3LGP49771 235 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TNFSF10P50591 281 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CBFBQ13951 182 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SYPL1Q16563 259 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 AKIRIN2Q53H80 203 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM74A1Q5RGS3 127 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 C1orf189Q5VU69 101 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 LAIR1Q6GTX8 287 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF322Q6U7Q0 402 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 GLB1LQ6UWU2 654 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ARIH2OSQ8N7S6 290 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 C19orf47Q8N9M1 422 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR52B6Q8NGF0 335 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SMPDL3AQ92484 453 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MIB2Q96AX9 1013 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MRPL38Q96DV4 380 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 KTI12Q96EK9 354 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SMIM12Q96EX1 92 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TRMT61AQ96FX7 289 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MED8Q96G25 268 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 BSCL2Q96G97 398 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 KIRREL1Q96J84 757 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 COPS8Q99627 209 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 PIGQQ9BRB3 760 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NIPSNAP3BQ9BS92 247 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 BOCQ9BWV1 1114 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ULBP1Q9BZM6 244 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CTDSP1Q9GZU7 261 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 WWTR1Q9GZV5 400 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TLNRD1Q9H1K6 362 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 IKZF5Q9H5V7 419 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 KIR3DX1Q9H7L2 352 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ASF1BQ9NVP2 202 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ARL15Q9NXU5 204 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MARCH4Q9P2E8 410 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SUSD2Q9UGT4 822 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RNF150Q9ULK6 438 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM50BQ9Y247 325 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NOP16Q9Y3C1 178 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CFAP20Q9Y6A4 193 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TBC1D3KA0A087X1G2 549 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TLCD2A6NGC4 264 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RNASEK-C17orf49H0YIS7 233 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CLDN34H7C241 214 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 PHOX2AO14813 284 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FFAR3O14843 346 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 GPR42O15529 346 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF208O43345 1280 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MED6O75586 246 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SYPP08247 313 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ANXA4P09525 319 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ECI1P42126 302 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RPS10P46783 165 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 LUMP51884 338 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF136P52737 540 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM3AP98173 230 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FABP5Q01469 135 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ADIGQ0VDE8 80 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM53BQ14153 422 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 PDGFRLQ15198 375 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 DECR1Q16698 335 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TM4SF20Q53R12 229 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 EOGTQ5NDL2 527 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 PRAMEF19Q5SWL8 479 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 C9orf135Q5VTT2 229 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF585AQ6P3V2 769 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM88Q6PEY1 159 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ARL9Q6T311 187 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 COMMD6Q7Z4G1 85 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 GOLGA7Q7Z5G4 137 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CEACAM19Q7Z692 300 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR2L13Q8N349 312 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 BPIFB2Q8N4F0 458 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 BPIFCQ8NFQ6 507 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR51G2Q8NGK0 314 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms