RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	IFFO1	Q0D2I5	559 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	LRRC74A	Q0VAA2	488 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	OCLN	Q16625	522 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	PDCD4	Q53EL6	469 aa	Known RBP	6.58	□□□□□ -1.36
NVL-223	ENST00000496393	ESCO2	Q56NI9	601 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	FAM91A1	Q658Y4	838 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	RUSC1-AS1	Q66K80	236 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	NXN	Q6DKJ4	435 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	OGFOD2	Q6N063	350 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	C10orf111	Q8N326	155 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	HIPK4	Q8NE63	616 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	OR9I1	Q8NGQ6	314 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	OR6X1	Q8NH79	312 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	FAM110D	Q8TAY7	271 aa	Predicted RBP	6.58	□□□□□ -1.36
NVL-223	ENST00000496393	KLF14	Q8TD94	323 aa	Predicted RBP	6.58	□□□□□ -1.36
NVL-223	ENST00000496393	SLC35B4	Q969S0	331 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	MCHR2	Q969V1	340 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	MARS2	Q96GW9	593 aa	Known RBP	6.58	□□□□□ -1.36
NVL-223	ENST00000496393	SLC25A44	Q96H78	314 aa	Predicted RBP	6.58	□□□□□ -1.36
NVL-223	ENST00000496393	ITCH	Q96J02	903 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	ARHGDIG	Q99819	225 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	CITED1	Q99966	193 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	CHIA	Q9BZP6	476 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	TMEM27	Q9HBJ8	222 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	BCL2L10	Q9HD36	194 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	A4GALT	Q9NPC4	353 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	C1RL	Q9NZP8	487 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	LGALS13	Q9UHV8	139 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	SLC13A4	Q9UKG4	626 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	PRDM4	Q9UKN5	801 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	MMP24	Q9Y5R2	645 aa		6.58	□□□□□ -1.36
NVL-223	ENST00000496393	LOC100509620	A0A075B734	347 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	CLPSL1	A2RUU4	121 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393		A8MXK9	166 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	SRRM5	B3KS81	715 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393		F5H0A9	414 aa	Predicted RBP	6.57	□□□□□ -1.36
NVL-223	ENST00000496393	TIMM23	O14925	209 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ENTPD5	O75356	428 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	SLC22A3	O75751	556 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	SLC2A10	O95528	541 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	PLAT	P00750	562 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	NGF	P01138	241 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	PTH	P01270	115 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	IGHG1	P01857	330 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	UMPS	P11172	480 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	RPS2	P15880	293 aa	Known RBP	6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF32	P17041	273 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	GDI2	P50395	445 aa	Known RBP	6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF84	P51523	738 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	PPP1CB	P62140	327 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ERVK-25	P63136	954 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	CBX1	P83916	185 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	PAX8	Q06710	450 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	FMOD	Q06828	376 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	RGN	Q15493	299 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	TMEM155	Q4W5P6	130 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	RUNDC3A	Q59EK9	446 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	GCNT6	Q5T4J0	391 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ASPHD2	Q6ICH7	369 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	DHRS4L2	Q6PKH6	230 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	SLC2A7	Q6PXP3	512 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	BTNL3	Q6UXE8	466 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	NOXO1	Q8NFA2	376 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	OR2Z1	Q8NG97	314 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	OR10S1	Q8NGN2	331 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	OR6S1	Q8NH40	331 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ITLN1	Q8WWA0	313 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	NSMAF	Q92636	917 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	POM121L2	Q96KW2	1035 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	SIGLEC11	Q96RL6	698 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	TMEM43	Q9BTV4	400 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.57	□□□□□ -1.36
NVL-223	ENST00000496393	POFUT1	Q9H488	388 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	CCNB1IP1	Q9NPC3	277 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	THUMPD1	Q9NXG2	353 aa	Known RBP	6.57	□□□□□ -1.36
NVL-223	ENST00000496393	TAS2R5	Q9NYW4	299 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	EIF3K	Q9UBQ5	218 aa	Known RBP	6.57	□□□□□ -1.36
NVL-223	ENST00000496393	ANGPT4	Q9Y264	503 aa		6.57	□□□□□ -1.36
NVL-223	ENST00000496393	RYR3	Q15413	4870 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	IGHV2-70D	A0A0C4DH43	119 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	IGHV3-64D	A0A0J9YX35	117 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393		A0A1B0GUS0	222 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	SLC22A31	A6NKX4	558 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	CPSF4L	A6NMK7	179 aa	Known RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MCIDAS	D6RGH6	385 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	CLIC1	O00299	241 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MGRN1	O60291	552 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MT-ATP6	P00846	226 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	F13B	P05160	661 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	IL6	P05231	212 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	CD55	P08174	381 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ZCCHC18	P0CG32	403 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	KIT	P10721	976 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ETS2	P15036	469 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	H2AFX	P16104	143 aa	Predicted RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	SELE	P16581	610 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MDH2	P40926	338 aa	Known RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	PCBP3	P57721	371 aa	Known RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	CDK6	Q00534	326 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	BST1	Q10588	318 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms