RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 OMGP23515 440 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 SLC6A2P23975 617 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 PCGF2P35227 344 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 SPRNQ5BIV9 151 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 ZMAT1Q5H9K5 638 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 C16orf87Q6PH81 154 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 SPATC1Q76KD6 591 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 ARMC8Q8IUR7 673 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 C1orf174Q8IYL3 243 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 OR52E2Q8NGJ4 325 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 SLC19A3Q9BZV2 496 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 SIAEQ9HAT2 523 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 DCAF16Q9NXF7 216 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 SLC25A37Q9NYZ2 338 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 KLHL21Q9UJP4 597 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 FMO6PO60774 539 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 EDF1O60869 148 aaKnown RBP17.54■□□□□ 0.4
NELFE-210ENST00000491139 GPANK1O95872 356 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 AQP1P29972 269 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 GDI2P50395 445 aaKnown RBP17.54■□□□□ 0.4
NELFE-210ENST00000491139 SEC61A1P61619 476 aaKnown RBP17.54■□□□□ 0.4
NELFE-210ENST00000491139 TNFAIP6P98066 277 aaPredicted RBP17.54■□□□□ 0.4
NELFE-210ENST00000491139 HNRNPA0Q13151 305 aaKnown RBP17.54■□□□□ 0.4
NELFE-210ENST00000491139 SCARB2Q14108 478 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 TMEM155Q4W5P6 130 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 HSP90B2PQ58FF3 399 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 TTC33Q6PID6 262 aaPredicted RBP17.54■□□□□ 0.4
NELFE-210ENST00000491139 C10orf111Q8N326 155 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 NOXO1Q8NFA2 376 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 MSL2Q9HCI7 577 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 TMEM106BQ9NUM4 274 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 OR5V1Q9UGF6 321 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 ZNF229Q9UJW7 825 aa17.54■□□□□ 0.4
NELFE-210ENST00000491139 LOC100509620A0A075B734 347 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 A0A1B0GUS0 222 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 A8MXK9 166 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 M0R3H8 397 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 KNG1P01042 644 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 UMPSP11172 480 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 ZNF32P17041 273 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 PPIBP23284 216 aaKnown RBP17.53■□□□□ 0.4
NELFE-210ENST00000491139 IDH3AP50213 366 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 PPP1CBP62140 327 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 ESCO2Q56NI9 601 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 LRIF1Q5T3J3 769 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 C17orf107Q6ZR85 190 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 C9orf139Q6ZV77 190 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 LRRC28Q86X40 367 aaPredicted RBP17.53■□□□□ 0.4
NELFE-210ENST00000491139 MSRB3Q8IXL7 192 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 PARP8Q8N3A8 854 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 ABHD4Q8TB40 342 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 MRPL13Q9BYD1 178 aaKnown RBP17.53■□□□□ 0.4
NELFE-210ENST00000491139 CCDC134Q9H6E4 229 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 TMEM38AQ9H6F2 299 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 ARMCX1Q9P291 453 aa17.53■□□□□ 0.4
NELFE-210ENST00000491139 IGHV3OR16-10A0A075B7F0 116 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 A0A1W2PRG6 482 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 CENPBD1B2RD01 187 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 MCIDASD6RGH6 385 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 H3BSA7 217 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 KPNA4O00629 521 aaPredicted RBP17.52■□□□□ 0.4
NELFE-210ENST00000491139 ASAH2BP0C7U1 165 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 IGHV4-38-2P0DP08 117 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 CDAP32320 146 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 CD80P33681 288 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 BTG1P62324 171 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 MRPS34P82930 218 aaKnown RBP17.52■□□□□ 0.4
NELFE-210ENST00000491139 PAX8Q06710 450 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 SRSF4Q08170 494 aaKnown RBP17.52■□□□□ 0.4
NELFE-210ENST00000491139 RFPL4BQ6ZWI9 263 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 NANOGNBQ7Z5D8 188 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 JAZF1Q86VZ6 243 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 SMYD1Q8NB12 490 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 AKR7LQ8NHP1 331 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 SEPHS2Q99611 448 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 PDP1Q9P0J1 537 aaPredicted RBP17.52■□□□□ 0.4
NELFE-210ENST00000491139 SLAMF8Q9P0V8 285 aa17.52■□□□□ 0.4
NELFE-210ENST00000491139 SOX21Q9Y651 276 aaPredicted RBP17.52■□□□□ 0.4
NELFE-210ENST00000491139 CPSF4LA6NMK7 179 aaKnown RBP17.51■□□□□ 0.39
NELFE-210ENST00000491139 BLOC1S5-TXNDC5H3BN57 136 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 TIMM8AO60220 97 aaPredicted RBP17.51■□□□□ 0.39
NELFE-210ENST00000491139 PPIAL4GP0DN37 164 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 ZNF133P52736 654 aaPredicted RBP17.51■□□□□ 0.39
NELFE-210ENST00000491139 STX1BP61266 288 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 CDK5R2Q13319 367 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 MTX3Q5HYI7 312 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 ENTPD8Q5MY95 495 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 C10orf128Q5T292 105 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 HDDC2Q7Z4H3 204 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 ZER1Q7Z7L7 766 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 ZNF283Q8N7M2 679 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 WFDC12Q8WWY7 111 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 CCT8L2Q96SF2 557 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 ARHGDIGQ99819 225 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 EBF4Q9BQW3 602 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 BEX1Q9HBH7 125 aa17.51■□□□□ 0.39
NELFE-210ENST00000491139 F5H0A9 414 aaPredicted RBP17.5■□□□□ 0.39
NELFE-210ENST00000491139 TRMUO75648 421 aaKnown RBP17.5■□□□□ 0.39
NELFE-210ENST00000491139 NGFP01138 241 aa17.5■□□□□ 0.39
NELFE-210ENST00000491139 ACADSP16219 412 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms