RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TM4SF18Q96CE8 201 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SMIM10Q96HG1 83 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 FCRL1Q96LA6 429 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 MAPKAP1Q9BPZ7 522 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ATG101Q9BSB4 218 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 AICDAQ9GZX7 198 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 C5orf66Q9H5L9 145 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 FNDC4Q9H6D8 234 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 REEP4Q9H6H4 257 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 RPF2Q9H7B2 306 aaKnown RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 RMND5AQ9H871 391 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 LYRM4Q9HD34 91 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 C14orf105Q9NVL8 296 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ZNF282Q9UDV7 671 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 BAIAP2L1Q9UHR4 511 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ZNF780BQ9Y6R6 833 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ZFHX2Q9C0A1 2572 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 GVINP1Q7Z2Y8 2422 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 NUP210LQ5VU65 1888 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SDK2Q58EX2 2172 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 SPTBN5Q9NRC6 3674 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 NUP214P35658 2090 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 CEP250Q9BV73 2442 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 IGHV4-30-2A0A087WSY4 118 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 TRABD2BA6NFA1 517 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 H3BMH7 237 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 NVLO15381 856 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 RAD1O60671 282 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ANP32DO95626 131 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 CPSF4O95639 269 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 IFNA16P05015 189 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 IL6P05231 212 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 HEXBP07686 556 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 FHP07954 510 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 C8orf89P0DMQ9 161 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 COX4I1P13073 169 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 GP9P14770 177 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 TNNI3P19429 210 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 CSNK2A2P19784 350 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 TCN2P20062 427 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 C4BPBP20851 252 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 PRDX6P30041 224 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 GPR183P32249 361 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 MPIP34949 423 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 DLSTP36957 453 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 OR3A1P47881 315 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 MRPL19P49406 292 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 XKP51811 444 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 MNAT1P51948 309 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 NCBP2P52298 156 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBR3-209ENST00000477461 POLR2JP52435 117 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 EMP2P54851 167 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 HSD17B7P56937 341 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 RPP38P78345 283 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 DHODHQ02127 395 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 LRRC74AQ0VAA2 488 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 STX5Q13190 355 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 BIKQ13323 160 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 CYLC2Q14093 348 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 SERTAD2Q14140 314 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 KIAA0040Q15053 153 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 C15orf32Q32M92 178 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 VWA2Q5GFL6 755 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ANXA8L1Q5VT79 327 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 OR4F3Q6IEY1 312 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 FAM71E1Q6IPT2 247 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 SLC48A1Q6P1K1 146 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 FAM199XQ6PEV8 388 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 CCDC121Q6ZUS5 278 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 PRSS41Q7RTY9 318 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 TRPM8Q7Z2W7 1104 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 SNX32Q86XE0 403 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 MARCH9Q86YJ5 346 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 SIAH3Q8IW03 269 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 KRTCAP2Q8N6L1 136 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 TRIML2Q8N7C3 387 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 OR4K14Q8NGD5 310 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 OR9I1Q8NGQ6 314 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 TESCQ96BS2 214 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 SNRNP40Q96DI7 357 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 CMTM5Q96DZ9 223 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 C11orf24Q96F05 449 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 ZBED6CLQ96FA7 236 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 RBM18Q96H35 190 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 NEDD4LQ96PU5 975 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 OR52E6Q96RD3 313 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 PELOQ9BRX2 385 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 PAPOLGQ9BWT3 736 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 ZNF717Q9BY31 904 aaPredicted RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 NMUR2Q9GZQ4 415 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 WDR54Q9H977 334 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 LHX9Q9NQ69 397 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 SAR1AQ9NR31 198 aa3.17□□□□□ -1.9
UBR3-209ENST00000477461 PNO1Q9NRX1 252 aaKnown RBP3.17□□□□□ -1.9
UBR3-209ENST00000477461 GPR173Q9NS66 373 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms