RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ARHGDIGQ99819 225 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 SLC19A3Q9BZV2 496 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 IKZF5Q9H5V7 419 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 PATZ1Q9HBE1 687 aaKnown RBP17.26■□□□□ 0.35
VPS36-203ENST00000475375 VAPAQ9P0L0 249 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 CGGBP1Q9UFW8 167 aaPredicted RBP17.26■□□□□ 0.35
VPS36-203ENST00000475375 OR5V1Q9UGF6 321 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 LOC100509620A0A075B734 347 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 TMEM120BA0PK00 339 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 CLDN34H7C241 214 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 TIMM8AO60220 97 aaPredicted RBP17.25■□□□□ 0.35
VPS36-203ENST00000475375 MGRN1O60291 552 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 SLC2A10O95528 541 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 ADH4P08319 380 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 ASAH2BP0C7U1 165 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 OMGP23515 440 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 RBMXP38159 391 aaKnown RBP17.25■□□□□ 0.35
VPS36-203ENST00000475375 ERVK-25P63136 954 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 MRPS34P82930 218 aaKnown RBP17.25■□□□□ 0.35
VPS36-203ENST00000475375 NPTX1Q15818 432 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 ESCO2Q56NI9 601 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 PAGE3Q5JUK9 113 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 RFPL4BQ6ZWI9 263 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 OR52E2Q8NGJ4 325 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 ADAMTS16Q8TE57 1224 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 NSMAFQ92636 917 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 SPDL1Q96EA4 605 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 MRPL13Q9BYD1 178 aaKnown RBP17.25■□□□□ 0.35
VPS36-203ENST00000475375 TMEM106BQ9NUM4 274 aa17.25■□□□□ 0.35
VPS36-203ENST00000475375 NOTCH1P46531 2555 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 TRAPPC13A5PLN9 417 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 TRMUO75648 421 aaKnown RBP17.24■□□□□ 0.35
VPS36-203ENST00000475375 CD55P08174 381 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 VIMP08670 466 aaKnown RBP17.24■□□□□ 0.35
VPS36-203ENST00000475375 ACADSP16219 412 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 TNFSF4P23510 183 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 SLC6A9P48067 706 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 DAP3P51398 398 aaKnown RBP17.24■□□□□ 0.35
VPS36-203ENST00000475375 RPL18Q07020 188 aaKnown RBP17.24■□□□□ 0.35
VPS36-203ENST00000475375 DUSP7Q16829 419 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 TNFAIP8L3Q5GJ75 292 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 JAZF1Q86VZ6 243 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 RBM45Q8IUH3 476 aaKnown RBP17.24■□□□□ 0.35
VPS36-203ENST00000475375 ASB10Q8WXI3 467 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 TMIGD2Q96BF3 282 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 CCDC167Q9P0B6 97 aa17.24■□□□□ 0.35
VPS36-203ENST00000475375 POLR3KQ9Y2Y1 108 aaPredicted RBP17.24■□□□□ 0.35
VPS36-203ENST00000475375 LYPD3O95274 346 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 THY1P04216 161 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 GPX2P18283 190 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 ARHGDIAP52565 204 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 UGT2B15P54855 530 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 BTG1P62324 171 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 PSG4Q00888 419 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 CD47Q08722 323 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 TAF11Q15544 211 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 TMEM155Q4W5P6 130 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 MTX3Q5HYI7 312 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 C10orf128Q5T292 105 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 BLOC1S3Q6QNY0 202 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 C1orf174Q8IYL3 243 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 ALDH16A1Q8IZ83 802 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 PARP8Q8N3A8 854 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 GPR32P1Q8NGA4 272 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 MPP4Q96JB8 637 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 NANOGQ9H9S0 305 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 INIPQ9NRY2 104 aa17.23■□□□□ 0.35
VPS36-203ENST00000475375 TANC2Q9HCD6 1990 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 CENPBD1B2RD01 187 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 H3BSA7 217 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 TGDSO95455 350 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 KNG1P01042 644 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 NGFP01138 241 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 IGHV4-38-2P0DP08 117 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 FMODQ06828 376 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 ZMYND11Q15326 602 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 CYP51A1Q16850 503 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 C16orf87Q6PH81 154 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 C17orf107Q6ZR85 190 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 ZER1Q7Z7L7 766 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 LRRC28Q86X40 367 aaPredicted RBP17.22■□□□□ 0.35
VPS36-203ENST00000475375 FUNDC1Q8IVP5 155 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 C11orf65Q8NCR3 313 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 OR2Z1Q8NG97 314 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 SEPHS2Q99611 448 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 OR2H1Q9GZK4 316 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 ELOVL3Q9HB03 270 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 STX18Q9P2W9 335 aaKnown RBP17.22■□□□□ 0.35
VPS36-203ENST00000475375 KLHL21Q9UJP4 597 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 UGT2A1Q9Y4X1 527 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 SOX21Q9Y651 276 aaPredicted RBP17.22■□□□□ 0.35
VPS36-203ENST00000475375 USH1CQ9Y6N9 552 aa17.22■□□□□ 0.35
VPS36-203ENST00000475375 PRKDCP78527 4128 aaKnown RBP17.21■□□□□ 0.35
VPS36-203ENST00000475375 TRBV5-3A0A0A0MS03 114 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 M0QX08 132 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 POLR3GO15318 223 aaPredicted RBP17.21■□□□□ 0.35
VPS36-203ENST00000475375 TNFRSF1AP19438 455 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 CD247P20963 164 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 AQP2P41181 271 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms