RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SLC38A5Q8WUX1 472 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 NSMAFQ92636 917 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 HIST1H2ACQ93077 130 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM54Q969K7 222 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 PPP1R14AQ96A00 147 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 NEIL1Q96FI4 390 aaPredicted RBP5.74□□□□□ -1.49
HDAC1-204ENST00000471488 OR2V2Q96R30 315 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF347Q96SE7 839 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 ZBTB18Q99592 522 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 CDADC1Q9BWV3 514 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 TRIM15Q9C019 465 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM27Q9HBJ8 222 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 TCF7L2Q9NQB0 619 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 ACOXLQ9NUZ1 547 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 SLC17A7Q9P2U7 560 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 MIOXQ9UGB7 285 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 SLC13A4Q9UKG4 626 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 POLR3KQ9Y2Y1 108 aaPredicted RBP5.74□□□□□ -1.49
HDAC1-204ENST00000471488 SIGLEC9Q9Y336 463 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 IFT52Q9Y366 437 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 POMT1Q9Y6A1 747 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 A0A0G2JPF8 293 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 HNRNPCL2B2RXH8 293 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 HNRNPCL3B7ZW38 293 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 F5H0A9 414 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 BLOC1S5-TXNDC5H3BN57 136 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM178BH3BS89 294 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 RFXANKO14593 260 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SURF4O15260 269 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ENSAO43768 121 aaKnown RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 HNRNPCL1O60812 293 aaKnown RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 MFN2O95140 757 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SLC2A10O95528 541 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ABHD16AO95870 558 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 CH25HO95992 272 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 IGHG1P01857 330 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 BGLAPP02818 100 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SHBGP04278 402 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 WNT2P09544 360 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 FAM153BP0C7A2 387 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 HNRNPCL4P0DMR1 293 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 PPIAL4GP0DN37 164 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 VSIG10L2P0DP72 767 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 GSTM3P21266 225 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 HTR2AP28223 471 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ECHS1P30084 290 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 GABRA5P31644 462 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SERPINB5P36952 375 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 MMP16P51512 607 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 RGS8P57771 180 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 UFM1P61960 85 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 CD69Q07108 199 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 PDCD4Q53EL6 469 aaKnown RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 C6orf10Q5SRN2 563 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 FAM201AQ5SY85 155 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 METTL11BQ5VVY1 283 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 MBNL2Q5VZF2 373 aaKnown RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ULK3Q6PHR2 472 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 LRFN4Q6PJG9 635 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ARL9Q6T311 187 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 DPPA2Q7Z7J5 298 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ZER1Q7Z7L7 766 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 RANBP3LQ86VV4 465 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM86BQ8N661 226 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF283Q8N7M2 679 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ADPRHL1Q8NDY3 354 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 OR5J2Q8NH18 312 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 OR6X1Q8NH79 312 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 DNAJA4Q8WW22 397 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 LRTOMTQ8WZ04 291 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 MAL2Q969L2 176 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 MCHR2Q969V1 340 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SLC25A44Q96H78 314 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SAMD8Q96LT4 415 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 CCDC115Q96NT0 180 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM246Q9BRR3 403 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 RSPO3Q9BXY4 272 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 SEMA6AQ9H2E6 1030 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 PPA2Q9H2U2 334 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 DPAGT1Q9H3H5 408 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 ELOVL3Q9HB03 270 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 MRPL39Q9NYK5 338 aaKnown RBP5.73□□□□□ -1.49
HDAC1-204ENST00000471488 BTNL2Q9UIR0 455 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 FOXJ3Q9UPW0 622 aa5.73□□□□□ -1.49
HDAC1-204ENST00000471488 LOC100509620A0A075B734 347 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CENPVL3A0A0U1RRI6 287 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 KIR2DS1A0A191URI9 304 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 LOC102725191A0A1B0GVB3 256 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 A0A1W2PPL8 197 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 ELOVL7A1L3X0 281 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 LRRC30A6NM36 301 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 P2RY10O00398 339 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 F13BP05160 661 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CD55P08174 381 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 NUDT7P0C024 238 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 IRF2P14316 349 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CFHR2P36980 270 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 GUCA1AP43080 201 aaPredicted RBP5.72□□□□□ -1.49
HDAC1-204ENST00000471488 IER3P46695 156 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 TXNL4AP83876 142 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms