RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TSPAN32Q96QS1 320 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 MCHR1Q99705 422 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 MRI1Q9BV20 369 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 ESM1Q9NQ30 184 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.74□□□□□ -1.17
CPSF4-211ENST00000471455 PURGQ9UJV8 347 aaKnown RBP7.74□□□□□ -1.17
CPSF4-211ENST00000471455 NUP50Q9UKX7 468 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 ZDHHC8Q9ULC8 765 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 PPIAL4AQ9Y536 164 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 GMEB1Q9Y692 573 aa7.74□□□□□ -1.17
CPSF4-211ENST00000471455 TMEM120BA0PK00 339 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 LRRN3E7EW58 273 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 POLR3GO15318 223 aaPredicted RBP7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SPRY3O43610 288 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 TPST1O60507 370 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 CH25HO95992 272 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 IGHV1-46P01743 117 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 IGHMP01871 453 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 ADH4P08319 380 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 CCL2P13500 99 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 CCNOP22674 350 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 TNFSF4P23510 183 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 STOMP27105 288 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 AQP1P29972 269 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 GUCA1AP43080 201 aaPredicted RBP7.73□□□□□ -1.17
CPSF4-211ENST00000471455 MTNR1AP48039 350 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 GDI2P50395 445 aaKnown RBP7.73□□□□□ -1.17
CPSF4-211ENST00000471455 ARHGDIAP52565 204 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 ERVS71-1P61550 626 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 BAMBIQ13145 260 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 MPP2Q14168 576 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 MELKQ14680 651 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 PDLIM3Q53GG5 364 aaPredicted RBP7.73□□□□□ -1.17
CPSF4-211ENST00000471455 LRFN4Q6PJG9 635 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 ARL9Q6T311 187 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 WDR88Q6ZMY6 472 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 COMTD1Q86VU5 262 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SLC30A8Q8IWU4 369 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 KLHL36Q8N4N3 616 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SIGLECL1Q8N7X8 197 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SYT14Q8NB59 555 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 C11orf65Q8NCR3 313 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 FGFBP3Q8TAT2 258 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 C22orf15Q8WYQ4 148 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 MCHR2Q969V1 340 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SPDL1Q96EA4 605 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 OR52B2Q96RD2 323 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SIAEQ9HAT2 523 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 SMURF2Q9HAU4 748 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 PLEK2Q9NYT0 353 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 OR5V1Q9UGF6 321 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 AUP1Q9Y679 476 aa7.73□□□□□ -1.17
CPSF4-211ENST00000471455 TRAPPC13A5PLN9 417 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 DNAJC9-AS1A6NH13 148 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 CPSF4LA6NMK7 179 aaKnown RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 CLDN34H7C241 214 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 M0R3H8 397 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 UBOX5O94941 541 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 RNASE1P07998 156 aaKnown RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 CD55P08174 381 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 HOXB9P17482 250 aaPredicted RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 GPX2P18283 190 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 TNFRSF1AP19438 455 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 MAKP20794 623 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 CPT2P23786 658 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 SLC18A1P54219 525 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 PCBD1P61457 104 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 MRPS34P82930 218 aaKnown RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 NPTX1Q15818 432 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 HIST3H3Q16695 136 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 CYP51A1Q16850 503 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 TMEM155Q4W5P6 130 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 TNFAIP8L3Q5GJ75 292 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 PABPC1L2AQ5JQF8 200 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 ENTPD8Q5MY95 495 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 C10orf128Q5T292 105 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 MBNL2Q5VZF2 373 aaKnown RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 PATL1Q86TB9 770 aaKnown RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 LRRC18Q8N456 261 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 FNDC8Q8TC99 324 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 IPCEF1Q8WWN9 437 aaPredicted RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 RASSF5Q8WWW0 418 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 DVL3Q92997 716 aaPredicted RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 ARHGDIGQ99819 225 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 MS4A7Q9GZW8 240 aaPredicted RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 SLITRK2Q9H156 845 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 UNKLQ9H9P5 680 aaKnown RBP7.72□□□□□ -1.17
CPSF4-211ENST00000471455 ELOVL3Q9HB03 270 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 TAS2R5Q9NYW4 299 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 SLC25A37Q9NYZ2 338 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 NPTNQ9Y639 398 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 CACNG2Q9Y698 323 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 U3KQE9 123 aa7.72□□□□□ -1.17
CPSF4-211ENST00000471455 C5orf49A4QMS7 147 aa7.71□□□□□ -1.18
CPSF4-211ENST00000471455 NPIPB13A6NJU9 1138 aa7.71□□□□□ -1.18
CPSF4-211ENST00000471455 NPIPB4C9JG80 1138 aa7.71□□□□□ -1.18
CPSF4-211ENST00000471455 BLOC1S5-TXNDC5H3BN57 136 aa7.71□□□□□ -1.18
CPSF4-211ENST00000471455 KPNA4O00629 521 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms