RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FGF7P21781 194 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF93P35789 620 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 LRRC56Q8IYG6 542 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SLC39A7Q92504 469 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 NMNAT3Q96T66 252 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SEC22CQ9BRL7 303 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 MFRPQ9BY79 579 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 BANF2Q9H503 90 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 NARFLQ9H6Q4 476 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 NRIP3Q9NQ35 241 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 OR5V1Q9UGF6 321 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 U3KQ87 197 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PPP1R11O60927 126 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 AQP8O94778 261 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 RPLP1P05386 114 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SELEP16581 610 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 FPR3P25089 353 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 TEKQ02763 1124 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GAMTQ14353 236 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR2G6Q5TZ20 316 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 NCR3LG1Q68D85 454 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ACSM6Q6P461 480 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 RANBP10Q6VN20 620 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 MOB3BQ86TA1 216 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM116Q8NCL8 245 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR10P1Q8NGE3 313 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR1L4Q8NGR5 311 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC7A6Q92536 515 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 BCL2L2Q92843 193 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 RNF2Q99496 336 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 CHRDL1Q9BU40 450 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 KCNG2Q9UJ96 466 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GDF2Q9UK05 429 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 AJAP1Q9UKB5 411 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 AUP1Q9Y679 476 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 J3KRW8 73 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 S100A8P05109 93 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 S100A11P31949 105 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GJA4P35212 333 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ECI1P42126 302 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF91Q05481 1191 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 LSAMPQ13449 338 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GDPGP1Q6ZNW5 385 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 DGAT2L6Q6ZPD8 337 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 AMIGO3Q86WK7 504 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PLPP7Q8NBV4 271 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 NUP37Q8NFH4 326 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR13C8Q8NGS7 320 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC22A12Q96S37 553 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SMIM7Q9BQ49 75 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 CABLES2Q9BTV7 478 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PIGMQ9H3S5 423 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF768Q9H5H4 540 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 KLK4Q9Y5K2 254 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SNX11Q9Y5W9 270 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 CICQ96RK0 1608 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF541Q9H0D2 1346 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 BLACEA4D250 179 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF815PA8K554 130 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 FAM166BA8MTA8 275 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 TBX19O60806 448 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OPN1MWP04001 364 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 HMGN2P05204 90 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OPN1MW2P0DN77 364 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OPN1MW3P0DN78 364 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 FDXRP22570 491 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PROZP22891 400 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF154Q13106 437 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC5A12Q1EHB4 618 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 NXNL2Q5VZ03 156 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 CYHR1Q6ZMK1 362 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SIAH3Q8IW03 269 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 C11orf40Q8WZ69 217 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 P2RY12Q9H244 342 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 FZD8Q9H461 694 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 LAMP3Q9UQV4 416 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC17A4Q9Y2C5 497 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 NFS1Q9Y697 457 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PRAMEF26H0Y7S4 382 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 LYZL6O75951 148 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 IGHEP01854 428 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 FBP1P09467 338 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 CRISP2P16562 243 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ERVPABLB-1P60509 514 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 WDR5P61964 334 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 HOXA4Q00056 320 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PAX5Q02548 391 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF85Q03923 595 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PLA1AQ53H76 456 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF788Q6ZQV5 615 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ACOT7LQ6ZUV0 252 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC51BQ86UW2 128 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ADIPOR2Q86V24 386 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GABRG1Q8N1C3 465 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ACOT4Q8N9L9 421 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GLIS1Q8NBF1 620 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR52E1Q8NGJ3 308 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PRSS3P2Q8NHM4 247 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms