RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 RRNAD1Q96FB5 475 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 PRSS27Q9BQR3 290 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 PBDC1Q9BVG4 233 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 SRMSQ9H3Y6 488 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC23A2Q9UGH3 650 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 SH2B3Q9UQQ2 575 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 VSIG4Q9Y279 399 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 KIAA1549LQ6ZVL6 1849 aa8.19□□□□□ -1.1
SMARCE1-207ENST00000469334 TRBV5-7A0A0A0MS05 114 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 A0A0G2JLL6 359 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 LOC100289279A0A1B0GTE1 492 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 EEF1E1-BLOC1S5C9J1V9 151 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PRAMEF26H0Y7S4 382 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 M0QZ92 97 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 DLEU1O43261 78 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 DOK2O60496 412 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ZFPL1O95159 310 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SFTPBP07988 381 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 TACSTD2P09758 323 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ELNP15502 786 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 MSX1P28360 303 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 IL2RGP31785 369 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PSMB10P40306 273 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SPINT3P49223 89 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ARRB1P49407 418 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 BPIFB3P59826 476 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC10A1Q14973 349 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 UBE2V2Q15819 145 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 GUK1Q16774 197 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF674Q2M3X9 581 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PRRT3Q5FWE3 981 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SAPCD1Q5SSQ6 148 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PHF19Q5T6S3 580 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 CYB5R2Q6BCY4 276 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 THSD4Q6ZMP0 1018 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PRRT2Q7Z6L0 340 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 HMGN2P46Q86SG4 172 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 MR1Q95460 341 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC22A18Q96BI1 424 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SEH1LQ96EE3 360 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PACRGQ96M98 296 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 OR7D2Q96RA2 312 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 MS4A8Q9BY19 250 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ACTR3CQ9C0K3 210 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC35B3Q9H1N7 401 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 KCNJ16Q9NPI9 418 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 LAMP5Q9UJQ1 280 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SERTAD3Q9UJW9 196 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 MRPS33Q9Y291 106 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF443Q9Y2A4 671 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 OR51B4Q9Y5P0 310 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 C9J4A7 227 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 M0QYG6 137 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 M0QZK8 103 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 AGPAT2O15120 278 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 GGCTO75223 188 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 C1orf105O95561 183 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 CSTBP04080 98 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 F13BP05160 661 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 HMGN2P05204 90 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SOD3P08294 240 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 OR8U9P0C7N5 309 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 DAOP14920 347 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 GABRR1P24046 479 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 FCARP24071 287 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 G0S2P27469 103 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 SERPINF1P36955 418 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 DIO1P49895 249 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 VASPP50552 380 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 NCBP2P52298 156 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 FAM3AP98173 230 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 LASP1Q14847 261 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 AKR1C8PQ5T2L2 129 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 C16orf59Q7L2K0 433 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 FAM220AQ7Z4H9 259 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 TAF8Q7Z7C8 310 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 GKN2Q86XP6 184 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 LFNGQ8NES3 379 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 OR9A2Q8NGT5 310 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 OR8U1Q8NH10 309 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 OR5AK2Q8NH90 309 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 GPR148Q8TDV2 347 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 NTNG2Q96CW9 530 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ZMYND19Q96E35 227 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 MVB12AQ96EY5 273 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 F2RL3Q96RI0 385 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 TTTY10Q9BZA0 68 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 RAB33BQ9H082 229 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 CST11Q9H112 138 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 NTNG1Q9Y2I2 539 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 ATG4BQ9Y4P1 393 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms