RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 PPIBP23284 216 aaKnown RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 AQP1P29972 269 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLC9A3R2Q15599 337 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 TTC33Q6PID6 262 aaPredicted RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 ZNF101Q8IZC7 436 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 KLHL36Q8N4N3 616 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLC25A40Q8TBP6 338 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 KLF14Q8TD94 323 aaPredicted RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 ZNF48Q96MX3 618 aaPredicted RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 ZNF347Q96SE7 839 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 DIRC2Q96SL1 478 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLC19A3Q9BZV2 496 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLC25A37Q9NYZ2 338 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 ZNF229Q9UJW7 825 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 POLR3KQ9Y2Y1 108 aaPredicted RBP12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 INSIG2Q9Y5U4 225 aa12.11□□□□□ -0.47
UPF3AP2-201ENST00000457924 C5orf49A4QMS7 147 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 M0R3H8 397 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 FMO6PO60774 539 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 UMPSP11172 480 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 MTNR1AP48039 350 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 GDI2P50395 445 aaKnown RBP12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 LRIF1Q5T3J3 769 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 LEG1Q6P5S2 330 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 ANKRD42Q8N9B4 389 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 NOXO1Q8NFA2 376 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 GEMIN6Q8WXD5 167 aaKnown RBP12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 DMRTB1Q96MA1 342 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 OR52B2Q96RD2 323 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 OR2J1Q9GZK6 312 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 TMEM38AQ9H6F2 299 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 NPHS2Q9NP85 383 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 CORO2BQ9UQ03 480 aa12.1□□□□□ -0.47
UPF3AP2-201ENST00000457924 A0A1W2PRG6 482 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 CPSF4LA6NMK7 179 aaKnown RBP12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 CENPBD1B2RD01 187 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 KPNA4O00629 521 aaPredicted RBP12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 CD55P08174 381 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 MDKP21741 143 aaPredicted RBP12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 WNT5AP41221 380 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLC6A9P48067 706 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 STX1BP61266 288 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 ENTPD8Q5MY95 495 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 HDDC2Q7Z4H3 204 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 NANOGNBQ7Z5D8 188 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 SMYD1Q8NB12 490 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 OR52E2Q8NGJ4 325 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 ABHD4Q8TB40 342 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 TAF15Q92804 592 aaKnown RBP eCLIP12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 TMIGD2Q96BF3 282 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 TMEM106BQ9NUM4 274 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 SLAMF8Q9P0V8 285 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 OR5V1Q9UGF6 321 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 ANGPT4Q9Y264 503 aa12.09□□□□□ -0.47
UPF3AP2-201ENST00000457924 LOC100509620A0A075B734 347 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 EVPLLA8MZ36 301 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 BLOC1S5-TXNDC5H3BN57 136 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 H3BSA7 217 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 VIMP08670 466 aaKnown RBP12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 ACADSP16219 412 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 ZNF32P17041 273 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 GPX2P18283 190 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 PCGF2P35227 344 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 SEC61A1P61619 476 aaKnown RBP12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 PPP1CBP62140 327 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 MRPS34P82930 218 aaKnown RBP12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 ESCO2Q56NI9 601 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 C10orf128Q5T292 105 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 C16orf87Q6PH81 154 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 SPATC1Q76KD6 591 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 MAVSQ7Z434 540 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 MPP4Q96JB8 637 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 SEPHS2Q99611 448 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 ARHGDIGQ99819 225 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 MSL2Q9HCI7 577 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 DCAF16Q9NXF7 216 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 VAPAQ9P0L0 249 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 KLHL21Q9UJP4 597 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 SLC7A7Q9UM01 511 aa12.08□□□□□ -0.48
UPF3AP2-201ENST00000457924 MMP24Q9Y5R2 645 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms