RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ATE1O95260 518 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 SLC2A10O95528 541 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 PPP1R3DO95685 299 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 RENP00797 406 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 IGLV1-44P01699 117 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 BMP4P12644 408 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ANXA8P13928 327 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ATP6V1B1P15313 513 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CD53P19397 219 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CRABP1P29762 137 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 GIPRP48546 466 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 FABP6P51161 128 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 IDH3GP51553 393 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ALDH3A2P51648 485 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CDH11P55287 796 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 FXYD6P3P58550 94 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 GABARAPL2P60520 117 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 PCBD1P61457 104 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 DCTN2Q13561 401 aaKnown RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 KRR1Q13601 381 aaKnown RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 DEFB113Q30KQ7 82 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 MESTQ5EB52 335 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 FAM27BQ5VT28 67 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 AGAP6Q5VW22 663 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ZNF620Q6ZNG0 422 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 USP51Q70EK9 711 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 AMIGO2Q86SJ2 522 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 MDP1Q86V88 176 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 JAZF1Q86VZ6 243 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 KBTBD8Q8NFY9 601 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 OR1J2Q8NGS2 313 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 LILRB1Q8NHL6 650 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 TMEM171Q8WVE6 324 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 GTPBP3Q969Y2 492 aaKnown RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 SNX18Q96RF0 628 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 FEVQ99581 238 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 DOK1Q99704 481 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CCL19Q99731 98 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 SLC29A1Q99808 456 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 FOXC2Q99958 501 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 DHRS9Q9BPW9 319 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 TSSK6Q9BXA6 273 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 C1orf198Q9H425 327 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CCNB1IP1Q9NPC3 277 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ETAA1Q9NY74 926 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 VNN3Q9NY84 501 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 USE1Q9NZ43 259 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 VSX1Q9NZR4 365 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 MOKQ9UQ07 419 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 CDH10Q9Y6N8 788 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ICE1Q9Y2F5 2266 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 FLNBO75369 2602 aaKnown RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 IQCMA0A1B0GVH7 501 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 A0A1W2PPL8 197 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 C12orf71A8MTZ7 269 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 SHISA9B4DS77 424 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 SLC16A7O60669 478 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 SMPD2O60906 423 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 SERPINA5P05154 406 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 CST2P09228 141 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 CECR9P0C854 216 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 JUNBP17275 347 aaPredicted RBP7.72□□□□□ -1.17
COL8A1-203ENST00000452013 LAP3P28838 519 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 APOBEC3AP31941 199 aaPredicted RBP7.72□□□□□ -1.17
COL8A1-203ENST00000452013 CDAP32320 146 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 CDKN2AP42771 156 aaKnown RBP7.72□□□□□ -1.17
COL8A1-203ENST00000452013 CENPAP49450 140 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 NAAAQ02083 359 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 HSF2Q03933 536 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 FMODQ06828 376 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 NPRL3Q12980 569 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 DAG1Q14118 895 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 CLEC12AQ5QGZ9 265 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 ZNF544Q6NX49 715 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 LEG1Q6P5S2 330 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 SYT9Q86SS6 491 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 HIPK1Q86Z02 1210 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 ZDHHC13Q8IUH4 622 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 GLB1L2Q8IW92 636 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 FBXL14Q8N1E6 418 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 LRRC18Q8N456 261 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 OR2T33Q8NG76 320 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 OR52E2Q8NGJ4 325 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 OR4K13Q8NH42 304 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 OR5K1Q8NHB7 308 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 RASD2Q96D21 266 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 RBM4BQ9BQ04 359 aaKnown RBP7.72□□□□□ -1.17
COL8A1-203ENST00000452013 RBM4Q9BWF3 364 aaKnown RBP7.72□□□□□ -1.17
COL8A1-203ENST00000452013 TEX12Q9BXU0 123 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 NUAK2Q9H093 628 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 RERGLQ9H628 205 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 EGLN3Q9H6Z9 239 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 SRA1Q9HD15 236 aaKnown RBP7.72□□□□□ -1.17
COL8A1-203ENST00000452013 PALMDQ9NP74 551 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 TBC1D23Q9NUY8 699 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 OAZ3Q9UMX2 235 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 LAMP3Q9UQV4 416 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 UGT2A1Q9Y4X1 527 aa7.72□□□□□ -1.17
COL8A1-203ENST00000452013 TIMM10BQ9Y5J6 103 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms