RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	SEC23B	Q15437	767 aa		13.6	□□□□□ -0.23
HDLBP-223	ENST00000449864	KRTAP21-3	Q3LHN1	58 aa		13.6	□□□□□ -0.23
HDLBP-223	ENST00000449864	FAM27B	Q5VT28	67 aa		13.6	□□□□□ -0.23
HDLBP-223	ENST00000449864	RASD2	Q96D21	266 aa		13.6	□□□□□ -0.23
HDLBP-223	ENST00000449864	YAE1D1	Q9NRH1	226 aa		13.6	□□□□□ -0.23
HDLBP-223	ENST00000449864	SIGLEC7	Q9Y286	467 aa		13.6	□□□□□ -0.23
HDLBP-223	ENST00000449864	RTTN	Q86VV8	2226 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864		A0A096LNT2	108 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	C12orf71	A8MTZ7	269 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	TLX2	O43763	284 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	CST2	P09228	141 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	ZNF26	P17031	533 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	MSR1	P21757	451 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	STOM	P27105	288 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	LAP3	P28838	519 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	SDHA	P31040	664 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	RRM2	P31350	389 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	NR4A2	P43354	598 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	SELENOV	P59797	346 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	PCBD1	P61457	104 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	NKPD1	Q17RQ9	610 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	MSMP	Q1L6U9	139 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	TMEM249	Q2WGJ8	235 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	MEST	Q5EB52	335 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	GPR139	Q6DWJ6	353 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	CYP2R1	Q6VVX0	501 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	FAM122B	Q7Z309	247 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	ZDHHC21	Q8IVQ6	265 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	AKR7L	Q8NHP1	331 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	FANK1	Q8TC84	345 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	NSL1	Q96IY1	281 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	BCL2L14	Q9BZR8	327 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	RERGL	Q9H628	205 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	REV1	Q9UBZ9	1251 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	IL20RA	Q9UHF4	553 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	GPR160	Q9UJ42	338 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	TMCC3	Q9ULS5	477 aa		13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	SON	P18583	2426 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-223	ENST00000449864	PRSS37	A4D1T9	235 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	C5orf49	A4QMS7	147 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	SOCS2	O14508	198 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	AHCYL1	O43865	530 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	OR10H3	O60404	316 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	RAD52	P43351	418 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	ALDH3B1	P43353	468 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	GDI2	P50395	445 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	RPS6KA3	P51812	740 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	KLF3	P57682	345 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	IQCC	Q4KMZ1	466 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	SMARCD3	Q6STE5	483 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	UNQ6126/PRO20091	Q6UXV3	157 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	FOXL2NB	Q6ZUU3	175 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	ADCK1	Q86TW2	530 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	LRP11	Q86VZ4	500 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	ALDH16A1	Q8IZ83	802 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	CPEB3	Q8NE35	698 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	C11orf40	Q8WZ69	217 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	FOXN4	Q96NZ1	517 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	GPX7	Q96SL4	187 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	FUZ	Q9BT04	418 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	MS4A5	Q9H3V2	200 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	NRIP3	Q9NQ35	241 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	POLE4	Q9NR33	117 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	MYEF2	Q9P2K5	600 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	ADAM21	Q9UKJ8	722 aa		13.58	□□□□□ -0.24
HDLBP-223	ENST00000449864	MALRD1	Q5VYJ5	2156 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	VWC2L	B2RUY7	222 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	ATP6V1B2	P21281	511 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	CALB2	P22676	271 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	IFNGR2	P38484	337 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	UCP2	P55851	309 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	PSG4	Q00888	419 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	ALKBH6	Q3KRA9	238 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	MTX3	Q5HYI7	312 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	THSD4	Q6ZMP0	1018 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	DPY19L2P2	Q6ZN68	376 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	ARHGAP24	Q8N264	748 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	ZNF540	Q8NDQ6	660 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	OR1J1	Q8NGS3	322 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	SYNPR	Q8TBG9	265 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	UBASH3B	Q8TF42	649 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	SNX33	Q8WV41	574 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	ZNF416	Q9BWM5	594 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	OR2H1	Q9GZK4	316 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	MUC13	Q9H3R2	512 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	EMC7	Q9NPA0	242 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	IL1RAP	Q9NPH3	570 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	ACTR3B	Q9P1U1	418 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	EIF3K	Q9UBQ5	218 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	TIMM10B	Q9Y5J6	103 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	IER3IP1	Q9Y5U9	82 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	TANC2	Q9HCD6	1990 aa		13.57	□□□□□ -0.24
HDLBP-223	ENST00000449864	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	2e-10	■■■■□ 19.9
HDLBP-223	ENST00000449864		A8MV72	311 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-223	ENST00000449864	SLC16A7	O60669	478 aa		13.56	□□□□□ -0.24
HDLBP-223	ENST00000449864	PTP4A3	O75365	173 aa		13.56	□□□□□ -0.24
HDLBP-223	ENST00000449864	PPP1R3D	O95685	299 aa		13.56	□□□□□ -0.24
HDLBP-223	ENST00000449864	IGFBP1	P08833	259 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-223	ENST00000449864	APEH	P13798	732 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms