RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IFNA16P05015 189 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ISG15P05161 165 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 WNT2P09544 360 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CCDC166P0CW27 439 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 T-ENOLP0DO92 83 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF12P17014 697 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CSNK2A2P19784 350 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SSTR5P35346 364 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 DCTP40126 519 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 RFC3P40938 356 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PRKXP51817 358 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CRYBA4P53673 196 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 UGT2B15P54855 530 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 BACE1P56817 501 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 RPL27P61353 136 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 RPS14P62263 151 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 BTG1P62324 171 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 RBX1P62877 108 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PSPHP78330 225 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SEMG2Q02383 582 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 RAB40BQ12829 278 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ILF3Q12906 894 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 DLG1Q12959 904 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 IL18R1Q13478 541 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ABRAXAS2Q15018 415 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PTGES3Q15185 160 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR10J3Q5JRS4 329 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OGFRL1Q5TC84 451 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 DDI2Q5TDH0 399 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PWWP2BQ6NUJ5 590 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 MED27Q6P2C8 311 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CD200R1LQ6Q8B3 271 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 C9orf139Q6ZV77 190 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 C16orf82Q7Z2V1 217 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 FBXO16Q8IX29 292 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR1M1Q8NGA1 313 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR51D1Q8NGF3 324 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR6K6Q8NGW6 343 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR10X1Q8NGY0 326 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR51A7Q8NH64 312 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 C8orf46Q8TAG6 207 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SYNPRQ8TBG9 265 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZPLD1Q8TCW7 415 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SFXN5Q8TD22 340 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TOMM40LQ969M1 308 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 SDSLQ96GA7 329 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 MS4A14Q96JA4 679 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF488Q96MN9 340 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TSNAXQ99598 290 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 URM1Q9BTM9 101 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CDCA4Q9BXL8 241 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TLNRD1Q9H1K6 362 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 DHX35Q9H5Z1 703 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF430Q9H8G1 570 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM27Q9HBJ8 222 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 DDX19AQ9NUU7 478 aaKnown RBP3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 IMPAD1Q9NX62 359 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PAK5Q9P286 719 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 PRODH2Q9UF12 536 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ARL2BPQ9Y2Y0 163 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF532Q9HCE3 1301 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 NOTCH4Q99466 2003 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 FLT4P35916 1363 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 MSH6P52701 1360 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 C9orf84Q5VXU9 1444 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 HMGXB3Q12766 1538 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 WIZO95785 1651 aa3.08□□□□□ -1.92
HMGB1P12-201ENST00000438594 IGHV2-70DA0A0C4DH43 119 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 KIR2DS1A0A191URI9 304 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 A0A1B0GTH9 108 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 A0A1B0GV72 72 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 TCRBV9S1A1TA0A576 114 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 EFCAB7A8K855 629 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RNF212BA8MTL3 300 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SEC14L6B5MCN3 397 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 GFYI3L273 518 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 PSMD12O00232 456 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 DFFAO00273 331 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC1A7O00341 560 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 PPIHO43447 177 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ENSAO43768 121 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 XPNPEP2O43895 674 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 UGT1A9O60656 530 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CLDN11O75508 207 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 MED6O75586 246 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ATP6V1G2O95670 118 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RAB36O95755 333 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 OAS1P00973 400 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 JCHAINP01591 159 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 BCHEP06276 602 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 FAM157CP0CG43 387 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 EFNA1P20827 205 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ELK4P28324 431 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 HTR1FP30939 366 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 FOXN2P32314 431 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RPL4P36578 427 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CEACAM6P40199 344 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CDKN2AP42771 156 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms