RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CLEC6AQ6EIG7 209 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 C2orf66Q6UXQ4 117 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 CERS6Q6ZMG9 384 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF620Q6ZNG0 422 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ARCQ7LC44 396 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF571Q7Z3V5 609 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF589Q86UQ0 364 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 THOC6Q86W42 341 aaKnown RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 MYOCDQ8IZQ8 938 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 PDIK1LQ8N165 341 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 OR9G1Q8NH87 305 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 TYMSOSQ8TAI1 123 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ARPC1AQ92747 370 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 TMEM54Q969K7 222 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ISOC2Q96AB3 205 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 FAM131CQ96AQ9 280 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 LRRC58Q96CX6 371 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 CPB2Q96IY4 423 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 C9orf72Q96LT7 481 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF396Q96N95 335 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 SH3GL1Q99961 368 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 APOL2Q9BQE5 337 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 PELOQ9BRX2 385 aaKnown RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 C19orf24Q9BVV8 132 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 NAA50Q9GZZ1 169 aaKnown RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 Q9H3A6 140 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 GOLPH3Q9H4A6 298 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZC4H2Q9NQZ6 224 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 MS4A12Q9NXJ0 267 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 EURLQ9NYK6 297 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 STMN3Q9NZ72 180 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 DDX19BQ9UMR2 479 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ING4Q9UNL4 249 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 SLC22A14Q9Y267 594 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 RCL1Q9Y2P8 373 aaKnown RBP2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 ATP6V1DQ9Y5K8 247 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 FLVCR1Q9Y5Y0 555 aa2.16□□□□□ -2.06
HMGB1P9-201ENST00000429856 BRD4O60885 1362 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 IGHV7-81A0A0B4J1V7 117 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 GLYATL1P3A0A0U1RQE8 302 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF816-ZNF321PA0A0X1KG74 233 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 USP27XA6NNY8 438 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 KLLNB2CW77 178 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 MRPS12O15235 138 aaKnown RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 CALUO43852 315 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 SOX15O60248 233 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 SLC19A2O60779 497 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 HSBP1O75506 76 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 VAPBO95292 243 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 TIMP1P01033 207 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 GLAP06280 429 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 KRT16P08779 473 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF250P15622 560 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 SLC2A5P22732 501 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 SLC26A3P40879 764 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 GPR1P46091 355 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 KCNJ3P48549 501 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 PLK1P53350 603 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 MYL6P60660 151 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 SELENOTP62341 195 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 CTAG1AP78358 180 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF33AQ06730 810 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 STX3Q13277 289 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 GPNMBQ14956 572 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 NCF4Q15080 339 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 VAMP3Q15836 100 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF726P1Q15940 193 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 PSG3Q16557 428 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 Q1RN00 199 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 RPEL1Q2QD12 228 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 FHL5Q5TD97 284 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 RSBN1Q5VWQ0 802 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF470Q6ECI4 717 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 WDR74Q6RFH5 385 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 TRMT10CQ7L0Y3 403 aaKnown RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF584Q8IVC4 421 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZADH2Q8N4Q0 377 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ARRDC1Q8N5I2 433 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 OR10G3Q8NGC4 313 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 TFGQ92734 400 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 STMN2Q93045 179 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ECHDC3Q96DC8 303 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF414Q96IQ9 312 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 MAP1LC3CQ9BXW4 147 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 HES7Q9BYE0 225 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 UPF3BQ9BZI7 483 aaKnown RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 NDEL1Q9GZM8 345 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 GBA3Q9H227 469 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 PIGUQ9H490 435 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 NTN4Q9HB63 628 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 CALYQ9NYX4 217 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 KCNIP1Q9NZI2 227 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 SENP1Q9P0U3 644 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 CLCF1Q9UBD9 225 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 UXTQ9UBK9 157 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 MOKQ9UQ07 419 aa2.15□□□□□ -2.07
HMGB1P9-201ENST00000429856 YARS2Q9Y2Z4 477 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms