RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 WIPI1Q5MNZ9 446 aaPredicted RBP12.6□□□□□ -0.39
RPL28-202ENST00000426763 MED18Q9BUE0 208 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 ATP23Q9Y6H3 246 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 SEC14L2O76054 403 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 ADH6P28332 368 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 MEOX1P50221 254 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 MTFR2Q6P444 385 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 OR4M1Q8NGD0 313 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 ZNF385DQ9H6B1 395 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
RPL28-202ENST00000426763 A0A087WUJ7 227 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 EML2O95834 649 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 IL7P13232 177 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 CCDC58Q4VC31 144 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 GALNT16Q8N428 558 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 C7orf34Q96L11 122 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 ARL6Q9H0F7 186 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 ACOXLQ9NUZ1 547 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 FAIMQ9NVQ4 179 aa12.6□□□□□ -0.39
RPL28-202ENST00000426763 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 HPP00738 406 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 ALDOBP05062 364 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 GRPP07492 148 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 PNLIPP16233 465 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 ZNF117Q03924 483 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 SLC14A1Q13336 389 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 Q6ZTK2 550 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 TMEM99Q8N816 258 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 BHLHE23Q8NDY6 225 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 GNG12Q9UBI6 72 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 SLC5A6Q9Y289 635 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 TMA7Q9Y2S6 64 aaKnown RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 GPR55Q9Y2T6 319 aaPredicted RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 ZC3H12DA2A288 527 aaKnown RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 RNF212BA8MTL3 300 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 M0R135 149 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 DHHO43323 396 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 CCL4P13236 92 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 CD82P27701 267 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 RPS18P62269 152 aaKnown RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 RPP30P78346 268 aaKnown RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 TNK1Q13470 666 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 ZNF169Q14929 603 aaPredicted RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 SYT6Q5T7P8 510 aaPredicted RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 WFDC8Q8IUA0 241 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 BPIFB2Q8N4F0 458 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 FAM71CQ8NEG0 241 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 FNDC9Q8TBE3 224 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 ZNF799Q96GE5 643 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 RNF170Q96K19 258 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 A0A096LPE4 126 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 C21orf140B9A014 251 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 H7C1Q1 480 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 SOD1P00441 154 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 GAAP10253 952 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 CHRNB4P30926 498 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 OR8G1Q15617 311 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 M1APQ8TC57 530 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 CTDSP2O14595 271 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 HEXAP06865 529 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 EDN3P14138 238 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 SRMP19623 302 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 BDH1Q02338 343 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 VASH2Q86V25 355 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 RNF128Q8TEB7 428 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 DCLRE1CQ96SD1 692 aaKnown RBP12.59□□□□□ -0.39
RPL28-202ENST00000426763 TMEM43Q9BTV4 400 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 TCFL5Q9UL49 500 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
RPL28-202ENST00000426763 EGR3Q06889 387 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 ADGRE4PQ86SQ3 457 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 GLYATL2Q8WU03 294 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 TIMD4Q96H15 378 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.39
RPL28-202ENST00000426763 LIN7BQ9HAP6 207 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 ZFP64Q9NPA5 681 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 SLC6A13Q9NSD5 602 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 MBD1Q9UIS9 605 aaPredicted RBP12.58□□□□□ -0.39
RPL28-202ENST00000426763 RAB22AQ9UL26 194 aa12.58□□□□□ -0.39
RPL28-202ENST00000426763 LSM5Q9Y4Y9 91 aaKnown RBP12.58□□□□□ -0.39
RPL28-202ENST00000426763 A0A0G2JMP0 313 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 LOC107986453A0A1B0GWG9 222 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 HSPB6O14558 160 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 IMPA2O14732 288 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPL28-202ENST00000426763 FAHD1Q6P587 224 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 CORO6Q6QEF8 472 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 OR4M2Q8NGB6 313 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 A0A1W2PPH5 198 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 ASPDHA6ND91 283 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 M0R1B8 84 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms