RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TMEM163Q8TC26 289 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ENKURQ8TC29 256 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 WDYHV1Q96HA8 205 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 NMNAT3Q96T66 252 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 PLSCR2Q9NRY7 297 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ING3Q9NXR8 418 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 IGSF10Q6WRI0 2623 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 MED12LQ86YW9 2145 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 A0A1B0GTH9 108 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 A0A1W2PNV4 684 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 LINC00862A6NCI5 91 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 ENTPD6O75354 484 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 CSF3P09919 207 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 IFNGR1P15260 489 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 SDHAP31040 664 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 RPS19P39019 145 aaKnown RBP13.82□□□□□ -0.2
SHMT2-202ENST00000414700 CDKN2AP42771 156 aaKnown RBP13.82□□□□□ -0.2
SHMT2-202ENST00000414700 AGFG1P52594 562 aaKnown RBP13.82□□□□□ -0.2
SHMT2-202ENST00000414700 SNRPGP62308 76 aaKnown RBP13.82□□□□□ -0.2
SHMT2-202ENST00000414700 MED22Q15528 200 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 SSX1Q16384 188 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF239Q16600 458 aaKnown RBP13.82□□□□□ -0.2
SHMT2-202ENST00000414700 LAMTOR1Q6IAA8 161 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 PLBD1Q6P4A8 553 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 ARHGAP11AQ6P4F7 1023 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 FAM131AQ6UXB0 335 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 GDPGP1Q6ZNW5 385 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 CPOQ8IVL8 374 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 SLC43A2Q8N370 569 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 CISD2Q8N5K1 135 aaKnown RBP13.82□□□□□ -0.2
SHMT2-202ENST00000414700 OTULINQ96BN8 352 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 OR5M11Q96RB7 305 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 EMC6Q9BV81 110 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 FN3KQ9H479 309 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 GRHPRQ9UBQ7 328 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 BAIAP2Q9UQB8 552 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 AUP1Q9Y679 476 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 FREM1Q5H8C1 2179 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 NBASA2RRP1 2371 aa13.82□□□□□ -0.2
SHMT2-202ENST00000414700 NPIPA2E9PIF3 369 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 NPIPA3F8WFD2 350 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 EIF1BO60739 113 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 HMGN1P05114 100 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 KIR2DL3P43628 341 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 SNRPD2P62316 118 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 LY6DQ14210 128 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 PRR30Q53SZ7 412 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 PXKQ7Z7A4 578 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 FAM26EQ8N5C1 309 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 SLC37A3Q8NCC5 494 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 ADPRHL1Q8NDY3 354 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 OR4M2Q8NGB6 313 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 PTP4A1Q93096 173 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 TMEM80Q96HE8 168 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 TXNIPQ9H3M7 391 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 FANCFQ9NPI8 374 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 TAS2R16Q9NYV7 291 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 RABL2AQ9UBK7 228 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 CAMK2AQ9UQM7 478 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 A0A1B0GVC2 190 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 OR6C68A6NDL8 312 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 KDM4EB2RXH2 506 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 TRAF3IP2O43734 574 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 MTRF1O75570 445 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 GYPBP06028 91 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 RPL27P61353 136 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 PAMR1Q6UXH9 720 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 B3GLCTQ6Y288 498 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 SLC35D2Q76EJ3 337 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 MEIOBQ8N635 442 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 NPEPL1Q8NDH3 523 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 OR9Q1Q8NGQ5 310 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF519Q8TB69 540 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 FNDC9Q8TBE3 224 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 ABHD3Q8WU67 409 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 PHF3Q92576 2039 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 TSSK2Q96PF2 358 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 DDOQ99489 341 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 TEX12Q9BXU0 123 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 EXOSC4Q9NPD3 245 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 CNOT2Q9NZN8 540 aaKnown RBP13.81□□□□□ -0.2
SHMT2-202ENST00000414700 HSPB11Q9Y547 144 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 ALG5Q9Y673 324 aa13.81□□□□□ -0.2
SHMT2-202ENST00000414700 COL6A6A6NMZ7 2263 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 A0A1W2PRG6 482 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 RIIAD1A6NNX1 92 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 AQP7O14520 342 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 BET1O15155 118 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 TXNDC12O95881 172 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 CPN1P15169 458 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ACVR1BP36896 505 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 PON3Q15166 354 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 TATDN3Q17R31 274 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 PXDC1Q5TGL8 231 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 FAM122CQ6P4D5 195 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 LEG1Q6P5S2 330 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 PLET1Q6UQ28 207 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 FAM180AQ6UWF9 173 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms