RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 GK2Q14410 553 aaPredicted RBP15.03■□□□□ -0
LIMS2-208ENST00000410011 ELAVL1Q15717 326 aaKnown RBP15.03■□□□□ -0
LIMS2-208ENST00000410011 CLVS2Q5SYC1 327 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 SFRP5Q5T4F7 317 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 ARHGAP40Q5TG30 622 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 OR7E24Q6IFN5 339 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 HSD17B13Q7Z5P4 300 aaPredicted RBP15.03■□□□□ -0
LIMS2-208ENST00000410011 ZNF784Q8NCA9 323 aaPredicted RBP15.03■□□□□ -0
LIMS2-208ENST00000410011 ELF4Q99607 663 aaPredicted RBP15.03■□□□□ -0
LIMS2-208ENST00000410011 ATG5Q9H1Y0 275 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 EXO5Q9H790 373 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 PFDN2Q9UHV9 154 aa15.03■□□□□ -0
LIMS2-208ENST00000410011 LDLRAD4O15165 306 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 SLC25A12O75746 678 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 FGF2P09038 288 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 GP1BBP13224 206 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 PRKACBP22694 351 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 HTR2CP28335 458 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 ELOCQ15369 112 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 ODF4Q2M2E3 257 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 YOD1Q5VVQ6 348 aaPredicted RBP15.02■□□□□ -0
LIMS2-208ENST00000410011 C5orf46Q6UWT4 87 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 METTL27Q8N6F8 245 aaPredicted RBP15.02■□□□□ -0
LIMS2-208ENST00000410011 OR6M1Q8NGM8 313 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 OR5M9Q8NGP3 310 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 LHFPL5Q8TAF8 219 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 SLC41A2Q96JW4 573 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 EDEM2Q9BV94 578 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 OR8D2Q9GZM6 311 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 SLC22A13Q9Y226 551 aa15.02■□□□□ -0
LIMS2-208ENST00000410011 NUDT21O43809 227 aaKnown RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 OR6A2O95222 327 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 SIX6O95475 246 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 HLA-DQA2P01906 255 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 CD74P04233 296 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 ISG15P05161 165 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 NUP62P37198 522 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 POLR2HP52434 150 aaKnown RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 EBPQ15125 230 aaKnown RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 TOMM34Q15785 309 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 C1QL3Q5VWW1 255 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 TMEM205Q6UW68 189 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 C17orf82Q86X59 251 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 STK35Q8TDR2 534 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 ATOH1Q92858 354 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 SLC38A3Q99624 504 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 NKX2-4Q9H2Z4 354 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 IGHV5-51A0A0C4DH38 117 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 LOC390937A0A1W2PQ73 354 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 SLC22A23A1A5C7 686 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 A8MVM7 634 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 H3BMH7 237 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 SLC16A7O60669 478 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 SRSF10O75494 262 aaKnown RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 CD8AP01732 235 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 POU3F2P20265 443 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-208ENST00000410011 MPGP29372 298 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 IL12BP29460 328 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 CRABP1P29762 137 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 AGTR1P30556 359 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 PNLIPRP2P54317 469 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 DCAF12L2Q5VW00 463 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 OR6S1Q8NH40 331 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 CLIP3Q96DZ5 547 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 ABHD6Q9BV23 337 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 CD207Q9UJ71 328 aa15.01□□□□□ -0.01
LIMS2-208ENST00000410011 FXYD6-FXYD2A0A087WZ82 144 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 C11orf98E9PRG8 122 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 RAB3DO95716 219 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 OR4E1P0C645 316 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 FGL1Q08830 312 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 SHHQ15465 462 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 TUSC1Q2TAM9 212 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 C4orf46Q504U0 113 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 C1orf100Q5SVJ3 147 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 ZNF660Q6AZW8 331 aaPredicted RBP15□□□□□ -0.01
LIMS2-208ENST00000410011 LPCAT3Q6P1A2 487 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 SLC35D2Q76EJ3 337 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 NDUFAF7Q7L592 441 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 LINC00052Q96N35 136 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 CHST6Q9GZX3 395 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 FXYD6Q9H0Q3 95 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 TTYH1Q9H313 450 aaPredicted RBP15□□□□□ -0.01
LIMS2-208ENST00000410011 TMEM138Q9NPI0 162 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 CUTCQ9NTM9 273 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 SOHLH2Q9NX45 425 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 SPTBP11277 2137 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 TCRBV16S1A1N1A0A5B0 115 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 PLPP3O14495 311 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 OR2T1O43869 369 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 ADAM8P78325 824 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 GLO1Q04760 184 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 DLX2Q07687 328 aaPredicted RBP15□□□□□ -0.01
LIMS2-208ENST00000410011 PCK2Q16822 640 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 ALKAL2Q6UX46 152 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 MARCH3Q86UD3 253 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 GKN2Q86XP6 184 aa15□□□□□ -0.01
LIMS2-208ENST00000410011 LYPD6Q86Y78 171 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms