RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 OR51B6Q9H340 312 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 LAMB4A4D0S4 1761 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 RFX2P48378 723 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 MAT1AQ00266 395 aaKnown RBP9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 CDC20Q12834 499 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 AANATQ16613 207 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 MANEAQ5SRI9 462 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 RNLSQ5VYX0 342 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 DHRS4L2Q6PKH6 230 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 MED25Q71SY5 747 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 FYTTD1Q96QD9 318 aaKnown RBP9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 TEAD3Q99594 435 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 TMEM43Q9BTV4 400 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 OBP2BQ9NPH6 170 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 TRAPPC2LQ9UL33 140 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 EXOGQ9Y2C4 368 aaKnown RBP9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 MED16Q9Y2X0 877 aa9.43□□□□□ -0.9
LIMCH1-203ENST00000396595 OR6C76A6NM76 312 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 PLPP1O14494 284 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 CTNSO60931 367 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 GPX5O75715 221 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SNCGO76070 127 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 MT-ATP6P00846 226 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 RAF1P04049 648 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 KRTDAPP60985 99 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SAXO2Q658L1 398 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 VWA1Q6PCB0 445 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 PRSS35Q8N3Z0 413 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 MAP3K3Q99759 626 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 EXOSC3Q9NQT5 275 aaKnown RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 BET1LQ9NYM9 111 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 GPR160Q9UJ42 338 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ZAR1LA6NP61 321 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 A8MVM7 634 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 TMX2-CTNND1H3BSU7 103 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 POU3F3P20264 500 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ZNF133P52736 654 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 GPR119Q8TDV5 335 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SLCO4A1Q96BD0 722 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 FGGYQ96C11 551 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SEMA6CQ9H3T2 930 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 OR14J1Q9UGF5 321 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SLC5A10A0PJK1 596 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 PRKRAO75569 313 aaKnown RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 FABP4P15090 132 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 HNF4GQ14541 408 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 TMEM52BQ4KMG9 183 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 FAM162BQ5T6X4 162 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SHEQ5VZ18 495 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 LRRC18Q8N456 261 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 OR5D18Q8NGL1 313 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ABHD6Q9BV23 337 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SLC25A32Q9H2D1 315 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ZNF195O14628 629 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 XRCC3O43542 346 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 BCL6P41182 706 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 RELL2Q8NC24 303 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 OR51S1Q8NGJ8 323 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 OR6S1Q8NH40 331 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 Q96M85 177 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 UBL7Q96S82 380 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 CCNL2Q96S94 520 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 GHRLQ9UBU3 117 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 SLC23A2Q9UGH3 650 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ACHEP22303 614 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 RAB13P51153 203 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 GABREP78334 506 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 ARG2P78540 354 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 TMEM183BQ1AE95 376 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 GLYR1Q49A26 553 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 CCSMST1Q4G0I0 132 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 BTNL8Q6UX41 500 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 OR4N2Q8NGD1 307 aa9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 DNMT3BQ9UBC3 853 aaKnown RBP9.42□□□□□ -0.9
LIMCH1-203ENST00000396595 PHF1O43189 567 aaPredicted RBP9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 SELENOFO60613 162 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 OR2F2O95006 317 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 ITGB8P26012 769 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 PTGER4P35408 488 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 P2RX1P51575 399 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 OR2F1Q13607 317 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 C1QTNF12Q5T7M4 302 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 PRSS45Q7RTY3 260 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 LINC00346Q8IVM7 164 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 CLEC1AQ8NC01 280 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 ZNF845Q96IR2 970 aaPredicted RBP9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 MED18Q9BUE0 208 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 LYRM4Q9HD34 91 aa9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.41□□□□□ -0.9
LIMCH1-203ENST00000396595 U3KQ87 197 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms