RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 LPAR4Q99677 370 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 CHRDQ9H2X0 955 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 SRA1Q9HD15 236 aaKnown RBP12.02□□□□□ -0.48
TRIM40-207ENST00000396581 GPR27Q9NS67 375 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 GPN3Q9UHW5 284 aaPredicted RBP12.02□□□□□ -0.48
TRIM40-207ENST00000396581 PLCL2Q9UPR0 1127 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 CLDN16Q9Y5I7 305 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 SCN2AQ99250 2005 aa12.02□□□□□ -0.48
TRIM40-207ENST00000396581 A0A1W2PPC4 97 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 TVP23AA6NH52 213 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 ELOA3DA6NLF2 546 aaPredicted RBP12.02□□□□□ -0.49
TRIM40-207ENST00000396581 BCL2L11O43521 198 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 GP1BAP07359 652 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 PRKACAP17612 351 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 CNR1P21554 472 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 ZP2Q05996 745 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 ELOA3BQ3SY89 546 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 TEX30Q5JUR7 227 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 PDSS1Q5T2R2 415 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 GLT8D1Q68CQ7 371 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 UQCC3Q6UW78 93 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 C17orf107Q6ZR85 190 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 DPY19L4Q7Z388 723 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 ELOA3Q8NG57 546 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 OR6N2Q8NGY6 317 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 OTOSQ8NHW6 89 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 ATOH1Q92858 354 aaPredicted RBP12.02□□□□□ -0.49
TRIM40-207ENST00000396581 DVL3Q92997 716 aaPredicted RBP12.02□□□□□ -0.49
TRIM40-207ENST00000396581 OR8B4Q96RC9 309 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 INTS14Q96SY0 518 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 FOXQ1Q9C009 403 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
TRIM40-207ENST00000396581 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF175Q9Y473 711 aa12.02□□□□□ -0.49
TRIM40-207ENST00000396581 A0A0A6YYH2 397 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 IGHV1OR15-9A0A0B4J2B8 117 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 SPTY2D1-AS1A0A0U1RR47 76 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 OR5H14A6NHG9 310 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 A6NJ64 397 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 RAB3DO95716 219 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FCER2P06734 321 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ACHEP22303 614 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 PGDP52209 483 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 RPL18Q07020 188 aaKnown RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FUT7Q11130 342 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FAM74A3Q4VXF1 159 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ARHGAP40Q5TG30 622 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 TMEM205Q6UW68 189 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 BEST3Q8N1M1 668 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 DEFB123Q8N688 67 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FRMD1Q8N878 549 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 STEAP2Q8NFT2 490 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 GRHPRQ9UBQ7 328 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 MRTO4Q9UKD2 239 aaKnown RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 RNF222A6NCQ9 220 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 TMEM200CA6NKL6 621 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 LDLRAD4O15165 306 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 IGFBP3P17936 291 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FSTP19883 344 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 MPZP25189 248 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 NR0B2Q15466 257 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 TCEA2Q15560 299 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ATPAF1Q5TC12 328 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FAM160A2Q8N612 972 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 OR1J4Q8NGS1 313 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 OR8S1Q8NH09 359 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 OR8K3Q8NH51 312 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 FAM174AQ8TBP5 190 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 GPBAR1Q8TDU6 330 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 RLN3Q8WXF3 142 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 SLC41A2Q96JW4 573 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 AMELYQ99218 206 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ULBP3Q9BZM4 244 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 NKX6-2Q9C056 277 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 PIGMQ9H3S5 423 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 SLC2A8Q9NY64 477 aa12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ZNF230Q9UIE0 474 aaPredicted RBP12.01□□□□□ -0.49
TRIM40-207ENST00000396581 ARHGEF17Q96PE2 2063 aaPredicted RBP12□□□□□ -0.49
TRIM40-207ENST00000396581 HCRTR1O43613 425 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 SIGLEC6O43699 453 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 RENP00797 406 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 F13BP05160 661 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 DHRS2Q13268 280 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 SKP2Q13309 424 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 SLC17A1Q14916 467 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 VWA2Q5GFL6 755 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 GALNT16Q8N428 558 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 OR9A4Q8NGU2 314 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 C16orf52Q8NHV5 167 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 RNF128Q8TEB7 428 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 CLDN23Q96B33 292 aa12□□□□□ -0.49
TRIM40-207ENST00000396581 FAM117AQ9C073 453 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms